Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 USP9YP27-201ENST00000418455 438 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 RPL34P6-201ENST00000432390 345 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 ATP5HP2-201ENST00000433885 485 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC009961.2-201ENST00000435771 251 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 MTND6P13-201ENST00000443510 523 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 TDGF1P1-201ENST00000445734 527 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 SLC31A1P1-201ENST00000451221 567 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 ACTR3P3-201ENST00000480448 893 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC020890.1-201ENST00000491837 504 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC022447.3-201ENST00000506865 495 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC111000.3-201ENST00000508057 576 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AF131216.2-201ENST00000512316 564 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 RNU1-6P-201ENST00000516290 144 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 FAM92A1P1-201ENST00000528023 890 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 CYCSP2-201ENST00000558168 301 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC025678.1-201ENST00000567861 338 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 PRELID3BP8-201ENST00000604148 295 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AL049539.1-201ENST00000611964 459 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 MIR6853-201ENST00000619642 74 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC068880.5-201ENST00000624331 290 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 AC112487.2-201ENST00000637950 304 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 STX3-208ENST00000641815 3236 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 MTND5P23-201ENST00000430812 1655 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 AL121950.1-201ENST00000624993 2077 ntBASIC4.63□□□□□ -1.67
VRK3Q8IV63 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.63□□□□□ -1.67
VRK3Q8IV63 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VRK3Q8IV63 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 MIR1303-201ENST00000408625 86 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 AMD1P2-201ENST00000412936 992 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 HMGB3P20-201ENST00000417997 600 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 NIPA2P1-201ENST00000426223 976 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC073335.1-201ENST00000427776 363 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC109583.1-201ENST00000432156 268 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 MTND4P19-201ENST00000446659 478 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 RPL7P59-201ENST00000447700 943 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 RPS27P23-201ENST00000487608 251 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 FGF7P4-201ENST00000509595 295 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 Y_RNA.693-201ENST00000516641 110 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 Y_RNA.704-201ENST00000516851 102 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 HMGB1P23-201ENST00000518743 568 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC027309.2-201ENST00000520566 192 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 MTND1P35-201ENST00000526739 508 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 CBX3P5-201ENST00000552017 521 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 RPS3AP23-202ENST00000574601 686 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC091042.1-201ENST00000579213 173 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC073091.2-201ENST00000603205 907 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC091488.1-201ENST00000604239 660 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AL035413.2-201ENST00000604801 525 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AL442067.2-201ENST00000614033 363 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AP001784.1-201ENST00000624107 428 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC116563.2-201ENST00000624751 535 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AC006065.6-201ENST00000625201 545 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 FARSBP1-201ENST00000435808 1778 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 HSPA8P17-201ENST00000427029 1382 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms