Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 RPS26P56-201ENST00000444468 240 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 PDSS1P2-201ENST00000449397 678 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 MTND2P3-201ENST00000452458 470 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 PRSS3P4-201ENST00000453323 162 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 RPL23AP14-201ENST00000468281 468 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC006499.5-201ENST00000505037 514 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 MTND4LP22-201ENST00000508209 276 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC104619.4-201ENST00000510773 249 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC007991.1-201ENST00000522680 631 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AL354760.1-201ENST00000608357 643 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC002546.1-201ENST00000588041 2504 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 UBE3AP2-201ENST00000429033 2259 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCXQ7RTU7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCXQ7RTU7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCXQ7RTU7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCXQ7RTU7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 Y_RNA.493-201ENST00000384422 102 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 MIR199A2-201ENST00000385289 110 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL356057.1-202ENST00000402263 756 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC068533.1-201ENST00000418542 415 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC002075.2-201ENST00000425207 252 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC093422.3-201ENST00000428506 305 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 UBE2V1P5-201ENST00000440070 405 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL035407.2-201ENST00000454090 378 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 HMGB1P25-201ENST00000468402 607 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 HMGN2P13-201ENST00000476476 274 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCXQ7RTU7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC110768.1-201ENST00000509222 400 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 RN7SKP18-201ENST00000516005 275 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 NDUFB9P3-201ENST00000521269 501 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 OR4T1P-201ENST00000554933 911 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 MIR5187-201ENST00000583479 76 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC017100.2-201ENST00000584628 355 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AC040174.2-201ENST00000602701 465 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 SRGNP1-201ENST00000603392 451 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 U3.45-201ENST00000607547 219 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 AL356118.1-201ENST00000635272 1078 ntBASIC2.41□□□□□ -2.02
SCXQ7RTU7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.41□□□□□ -2.02
SCXQ7RTU7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCXQ7RTU7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms