Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PLCE1P1-201ENST00000622094 305 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AP001350.1-201ENST00000601906 1524 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC091152.2-201ENST00000591628 2569 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 OR5T3-201ENST00000303059 1023 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 RNA5SP42-201ENST00000364278 115 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 RNA5SP267-201ENST00000364893 126 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 MIR591-201ENST00000385290 95 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 SNORD17-201ENST00000390930 237 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 MTND3P20-201ENST00000407663 186 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 TOMM22P1-201ENST00000418578 312 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 KRR1P1-201ENST00000419430 803 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 BX842559.1-201ENST00000419615 532 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 RPL31P12-201ENST00000422587 358 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 RPL21P110-201ENST00000433345 446 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 RPL23AP23-201ENST00000452590 471 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC087879.1-201ENST00000474343 374 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AP000893.1-201ENST00000474462 794 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 RN7SKP83-201ENST00000516512 178 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AL139174.1-201ENST00000531489 886 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC027104.1-201ENST00000563702 681 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC107954.1-201ENST00000565906 727 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 MIR4425-201ENST00000580572 84 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC008687.2-201ENST00000597865 520 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC096577.2-201ENST00000611455 153 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AL162233.1-201ENST00000620014 944 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AL590396.2-201ENST00000636511 1041 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 PWAR6-201ENST00000552334 4618 ntBASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H3F3CQ6NXT2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 RNU6-543P-201ENST00000362576 108 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 RNVU1-14-201ENST00000384770 164 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 RPL23AP47-201ENST00000408017 460 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 SNORA11.1-201ENST00000408133 129 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 RN7SKP53-201ENST00000411337 315 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 UBE2V1P11-201ENST00000411559 285 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 RPS20P25-201ENST00000412447 352 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 TATDN1P1-201ENST00000414123 891 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AL691517.1-201ENST00000440833 1235 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 ELOCP13-201ENST00000443934 329 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC092754.2-201ENST00000463506 460 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC008155.2-201ENST00000464337 397 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AP000563.1-201ENST00000490865 758 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC083923.1-201ENST00000523708 376 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AP001207.1-201ENST00000524051 481 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC008489.1-201ENST00000524271 483 ntBASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.25□□□□□ -1.89
H3F3CQ6NXT2 EIF5A2P1-201ENST00000564027 460 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms