Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CACNA1SQ13698 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CACNA1SQ13698 SNORA70B-201ENST00000384210 135 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1SQ13698 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.56□□□□□ -1.84
CACNA1SQ13698 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.56□□□□□ -1.84
CACNA1SQ13698 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.56□□□□□ -1.84
CACNA1SQ13698 ST13P14-201ENST00000474095 734 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 AC111000.5-201ENST00000506559 1178 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 AP004607.9-201ENST00000618202 316 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.56□□□□□ -1.84
CACNA1SQ13698 AC021755.1-201ENST00000559747 1447 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1SQ13698 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1SQ13698 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1SQ13698 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1SQ13698 SNORA46-201ENST00000384762 135 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 AC083906.5-201ENST00000503722 328 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 SCGB1D5P-201ENST00000515134 247 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1SQ13698 AC138761.3-201ENST00000579993 334 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 MIR4435-1-201ENST00000582552 80 ntBASIC3.56□□□□□ -1.84
CACNA1SQ13698 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.55□□□□□ -1.84
CACNA1SQ13698 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1SQ13698 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1SQ13698 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1SQ13698 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.55□□□□□ -1.84
CACNA1SQ13698 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.55□□□□□ -1.84
CACNA1SQ13698 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1SQ13698 MIR196B-201ENST00000384852 84 ntBASIC3.55□□□□□ -1.84
CACNA1SQ13698 AMD1P2-201ENST00000412936 992 ntBASIC3.55□□□□□ -1.84
CACNA1SQ13698 SMC4P1-201ENST00000414479 527 ntBASIC3.55□□□□□ -1.84
CACNA1SQ13698 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA1SQ13698 AC025423.2-201ENST00000537570 439 ntBASIC3.55□□□□□ -1.84
CACNA1SQ13698 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.55□□□□□ -1.84
CACNA1SQ13698 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.55□□□□□ -1.84
CACNA1SQ13698 AC068722.2-201ENST00000618734 544 ntBASIC3.55□□□□□ -1.84
CACNA1SQ13698 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
CACNA1SQ13698 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CACNA1SQ13698 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA1SQ13698 MIR3074-201ENST00000384885 81 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 RNA5SP21-201ENST00000410917 96 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC073508.1-201ENST00000428866 656 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 EIF2S2P4-201ENST00000461070 984 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC106734.1-201ENST00000568646 663 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC079089.3-201ENST00000603094 673 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CACNA1SQ13698 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CACNA1SQ13698 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 U3.6-201ENST00000363622 211 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC010095.1-201ENST00000443543 144 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 AL513124.1-201ENST00000450410 614 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AL590639.1-201ENST00000456484 337 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC007954.1-201ENST00000554198 494 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 AP000919.1-202ENST00000581139 1264 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 BNIP3P10-201ENST00000605360 577 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 AC004825.2-201ENST00000616634 455 ntBASIC3.54□□□□□ -1.84
CACNA1SQ13698 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1SQ13698 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CACNA1SQ13698 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.53□□□□□ -1.84
CACNA1SQ13698 AC004972.1-201ENST00000623934 2209 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AL589994.1-201ENST00000404962 340 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 NPM1P11-201ENST00000417106 855 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AC013268.2-201ENST00000420753 337 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AC007563.3-201ENST00000433233 371 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 FTH1P1-201ENST00000437933 532 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.53□□□□□ -1.84
CACNA1SQ13698 RAB28P3-201ENST00000448325 597 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 RPL21P71-201ENST00000465598 459 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 RN7SL442P-201ENST00000473804 320 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AC090525.1-201ENST00000479116 478 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CACNA1SQ13698 AC015849.6-201ENST00000605454 474 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AL159169.2-201ENST00000610061 1269 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AL136964.1-201ENST00000622038 2990 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AC064859.1-201ENST00000624741 174 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CACNA1SQ13698 CUL4AP1-201ENST00000514750 1863 ntBASIC3.53□□□□□ -1.84
CACNA1SQ13698 AC046144.1-201ENST00000478559 1853 ntBASIC3.52□□□□□ -1.85
CACNA1SQ13698 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1SQ13698 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1SQ13698 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1SQ13698 OR56A5-201ENST00000340110 738 ntBASIC3.52□□□□□ -1.85
CACNA1SQ13698 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.52□□□□□ -1.85
CACNA1SQ13698 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms