Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RPL31P61-201ENST00000496160 376 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN1BQ07699 AC021146.1-201ENST00000511202 716 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN1BQ07699 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN1BQ07699 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN1BQ07699 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.71□□□□□ -1.82
SCN1BQ07699 SNORD84-203ENST00000584275 78 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.71□□□□□ -1.82
SCN1BQ07699 AC024933.1-201ENST00000608472 348 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 AL161616.1-201ENST00000611867 286 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 AL590240.3-201ENST00000621416 943 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 AL360181.4-201ENST00000621752 134 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 AP001784.1-201ENST00000624107 428 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 AC010733.2-201ENST00000589496 5702 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN1BQ07699 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN1BQ07699 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.71□□□□□ -1.82
SCN1BQ07699 LINC00561-201ENST00000565815 2738 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCN1BQ07699 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SCN1BQ07699 RNU6-50P-201ENST00000362356 103 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 SNORD113.2-201ENST00000364166 89 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 RNU4-68P-201ENST00000364314 141 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
SCN1BQ07699 HMGN2P8-201ENST00000391458 268 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 DHFRP6-201ENST00000401776 268 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 ERHP2-201ENST00000402323 299 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AP000567.1-201ENST00000406413 156 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 RPL23AP26-201ENST00000412728 464 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC099677.1-201ENST00000420575 175 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN1BQ07699 MTND2P5-201ENST00000432656 1006 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.7□□□□□ -1.82
SCN1BQ07699 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN1BQ07699 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.7□□□□□ -1.82
SCN1BQ07699 RPL36AP15-201ENST00000444514 266 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 MTCO2P25-201ENST00000447065 681 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AL009048.1-201ENST00000450437 298 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC092155.2-201ENST00000454675 477 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 RPL23AP62-201ENST00000463396 453 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC134050.1-201ENST00000495088 933 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 MTCO2P32-201ENST00000514865 403 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC093853.1-201ENST00000515689 483 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.7□□□□□ -1.82
SCN1BQ07699 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.7□□□□□ -1.82
SCN1BQ07699 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN1BQ07699 AC051619.2-201ENST00000559063 397 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 HSPE1P3-201ENST00000559254 309 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 MIR4644-201ENST00000579929 84 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AP001269.3-201ENST00000588718 329 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 BNIP3P26-201ENST00000600827 554 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 BNIP3P11-201ENST00000603878 563 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC103710.3-201ENST00000608157 948 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SCN1BQ07699 AC025588.4-201ENST00000615802 908 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC015967.1-201ENST00000619893 476 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN1BQ07699 AC004009.2-201ENST00000623016 728 ntBASIC3.7□□□□□ -1.82
SCN1BQ07699 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN1BQ07699 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.7□□□□□ -1.82
SCN1BQ07699 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCN1BQ07699 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCN1BQ07699 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
SCN1BQ07699 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SCN1BQ07699 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCN1BQ07699 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SCN1BQ07699 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
SCN1BQ07699 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.69□□□□□ -1.82
SCN1BQ07699 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCN1BQ07699 RNU1-18P-201ENST00000363062 164 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 RNU6-560P-201ENST00000364007 108 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 RNA5SP87-201ENST00000384155 118 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 SNORA37-201ENST00000384504 129 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCN1BQ07699 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCN1BQ07699 MTCO2P8-201ENST00000412213 658 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AL049610.1-201ENST00000423374 372 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 EIF1P3-201ENST00000423841 334 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AL132765.1-201ENST00000434165 553 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 RPL12P26-201ENST00000452430 487 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.69□□□□□ -1.82
SCN1BQ07699 RPS4XP10-201ENST00000465034 731 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 RN7SL738P-201ENST00000470264 297 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.69□□□□□ -1.82
SCN1BQ07699 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AC023424.2-201ENST00000493479 777 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 RN7SL812P-201ENST00000493791 279 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 RNU6-583P-201ENST00000516012 92 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 RNU6-1095P-201ENST00000516148 108 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 IGLVIV-65-201ENST00000517313 360 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms