Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 IGKV2-26-201ENST00000518305 343 ntBASIC2.47□□□□□ -2.01
HIST1H1AQ02539 OR5B10P-201ENST00000532869 642 ntBASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 SNORD84-203ENST00000584275 78 ntBASIC2.47□□□□□ -2.01
HIST1H1AQ02539 MIR4276-201ENST00000584832 70 ntBASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AC115085.1-201ENST00000588924 229 ntBASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 U3.45-201ENST00000607547 219 ntBASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AC091903.1-201ENST00000624322 454 ntBASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AC015726.3-201ENST00000624501 418 ntBASIC2.47□□□□□ -2.01
HIST1H1AQ02539 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HIST1H1AQ02539 AL136520.1-201ENST00000600311 1322 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 RNA5SP50-201ENST00000363731 107 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 SNORA62.3-201ENST00000365110 153 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 SNORA46-201ENST00000384762 135 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 BX323014.1-201ENST00000412876 237 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC109780.2-201ENST00000413467 845 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC245054.2-201ENST00000415639 319 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 ATG3P1-201ENST00000419507 911 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 USP9YP36-201ENST00000424581 829 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 RPL39P40-201ENST00000445481 146 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 RSL24D1P2-201ENST00000445584 366 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 RN7SL542P-201ENST00000467147 294 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 RPL7P38-201ENST00000488396 739 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC005476.1-201ENST00000554427 397 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 MTCO3P13-201ENST00000577757 781 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 DUXAP4-201ENST00000603046 613 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC107871.2-201ENST00000612894 502 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AL157817.1-201ENST00000614264 790 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 MIR6864-201ENST00000617935 70 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AP000676.4-201ENST00000624659 623 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 AC244258.1-201ENST00000637553 1071 ntBASIC2.46□□□□□ -2.02
HIST1H1AQ02539 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HIST1H1AQ02539 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RPL21P75-201ENST00000396599 483 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RPL21P28-201ENST00000401418 483 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AL592114.1-201ENST00000403842 483 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 HNRNPDP2-201ENST00000406475 478 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RNA5SP492-201ENST00000411330 114 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 HSFY4P-201ENST00000415994 1181 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 SYF2P2-201ENST00000417620 583 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RBMY2UP-201ENST00000453474 324 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RPL21P39-201ENST00000463605 483 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC011979.1-201ENST00000472300 483 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RPL21P93-201ENST00000480465 489 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC233702.1-201ENST00000482905 502 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC087190.1-201ENST00000484462 480 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC093591.1-201ENST00000491435 481 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RPL21P129-201ENST00000491732 478 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RPL21P16-201ENST00000495531 483 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 HSPD1P15-201ENST00000505573 1122 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC098799.2-201ENST00000509466 868 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 RNU6-1073P-201ENST00000517182 106 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 SCARNA20.6-201ENST00000517251 106 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AC026403.1-201ENST00000518938 295 ntBASIC2.45□□□□□ -2.02
HIST1H1AQ02539 AP001207.2-201ENST00000519490 539 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms