Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RPL21P136-201ENST00000605378 396 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 OR2BH1P-201ENST00000608850 864 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS1Q01581 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC244258.1-201ENST00000637553 1071 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 OR8B1P-202ENST00000641132 1178 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS1Q01581 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS1Q01581 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS1Q01581 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 MTCO1P18-201ENST00000455518 1419 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS1Q01581 MIR16-2-201ENST00000362117 81 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 SNORA31-201ENST00000362607 130 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 RNA5SP27-201ENST00000363839 119 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 RNU6-481P-201ENST00000384194 107 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 RNA5SP107-201ENST00000411358 122 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC069157.1-201ENST00000421749 137 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 RPL31P12-201ENST00000422587 358 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC241520.1-201ENST00000422654 1099 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AL049610.1-201ENST00000423374 372 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AL050321.1-201ENST00000432363 400 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 HMGB3P11-201ENST00000440127 604 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC092641.1-201ENST00000440229 772 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS1Q01581 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 RN7SKP116-201ENST00000516902 319 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 OR5D17P-201ENST00000531492 978 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS1Q01581 OR6C73P-201ENST00000546432 358 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AL136520.1-202ENST00000555494 763 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC098483.2-201ENST00000603158 454 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 U3.45-201ENST00000607547 219 ntBASIC3.22□□□□□ -1.89
HMGCS1Q01581 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS1Q01581 AC008432.1-201ENST00000615912 1320 ntBASIC3.21□□□□□ -1.89
HMGCS1Q01581 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.21□□□□□ -1.89
HMGCS1Q01581 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.21□□□□□ -1.89
HMGCS1Q01581 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS1Q01581 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS1Q01581 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS1Q01581 CR383658.2-201ENST00000547576 1525 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 RNA5SP189-201ENST00000364920 115 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 MIR670-201ENST00000390142 98 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 SNORA40.4-201ENST00000390971 128 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 SKINT1L-201ENST00000401057 817 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 RNU2-65P-201ENST00000410162 185 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 RNU2-21P-201ENST00000410368 188 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 MTCO2P1-201ENST00000424648 477 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 ETF1P3-201ENST00000430422 1160 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 RPL21P110-201ENST00000433345 446 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC068135.1-201ENST00000446164 246 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 NPM1P49-201ENST00000448027 714 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 RPL26P28-201ENST00000451325 435 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 RBMY2UP-201ENST00000453474 324 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 OR5H3P-201ENST00000502817 919 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 RN7SKP277-201ENST00000516895 283 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC083923.1-201ENST00000523708 376 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HMGCS1Q01581 AP000916.1-201ENST00000533869 835 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC139103.1-201ENST00000534696 1030 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC004024.1-201ENST00000549244 247 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS1Q01581 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 AL158211.2-201ENST00000607282 395 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC018754.1-201ENST00000607486 925 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 AC092354.2-201ENST00000607786 514 ntBASIC3.21□□□□□ -1.9
HMGCS1Q01581 MIR8084-201ENST00000614105 89 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms