Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-618P-201ENST00000363518 112 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 NPM1P10-201ENST00000398310 865 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 RPL7P25-201ENST00000404151 721 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 RNA5SP425-201ENST00000410336 112 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 AC017078.1-201ENST00000416146 368 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 AC006989.1-201ENST00000427212 131 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 RPL23AP70-201ENST00000483361 460 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 OR4G11P-201ENST00000492842 939 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.99□□□□□ -2.09
PRKDCP78527 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.99□□□□□ -2.09
PRKDCP78527 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.99□□□□□ -2.09
PRKDCP78527 AC093831.2-201ENST00000624393 3427 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
PRKDCP78527 AC107027.3-201ENST00000565095 3473 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 Z99127.3-201ENST00000448158 395 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 AC126121.1-201ENST00000482313 553 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 AC055855.1-201ENST00000489563 579 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.99□□□□□ -2.09
PRKDCP78527 RNU6-1053P-201ENST00000515930 101 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 AC092608.2-201ENST00000624427 218 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 AC063952.1-203ENST00000634410 658 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PRKDCP78527 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PRKDCP78527 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PRKDCP78527 RPL7P10-201ENST00000417407 739 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 HMGN1P5-201ENST00000448591 263 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC1.99□□□□□ -2.09
PRKDCP78527 AP000859.1-201ENST00000525536 307 ntBASIC1.99□□□□□ -2.09
PRKDCP78527 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PRKDCP78527 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.99□□□□□ -2.09
PRKDCP78527 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC1.99□□□□□ -2.09
PRKDCP78527 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PRKDCP78527 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.99□□□□□ -2.09
PRKDCP78527 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC1.98□□□□□ -2.09
PRKDCP78527 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 RPL23AP22-201ENST00000437556 453 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
PRKDCP78527 snoU13.18-201ENST00000459483 104 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 IGHV3-63-201ENST00000518422 341 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 WDR61-205ENST00000558459 884 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC025034.2-201ENST00000623264 286 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.98□□□□□ -2.09
PRKDCP78527 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 RPL9P6-201ENST00000492764 598 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 AC092045.1-201ENST00000495716 1231 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.98□□□□□ -2.09
PRKDCP78527 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.98□□□□□ -2.09
PRKDCP78527 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
PRKDCP78527 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
PRKDCP78527 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 CYCSP49-201ENST00000420810 319 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 DPH3P2-201ENST00000422618 250 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 AP001317.1-201ENST00000531194 960 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC023043.2-201ENST00000589678 1026 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
PRKDCP78527 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC1.98□□□□□ -2.09
PRKDCP78527 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PRKDCP78527 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRKDCP78527 AC009101.1-201ENST00000568135 242 ntBASIC1.98□□□□□ -2.09
PRKDCP78527 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC1.98□□□□□ -2.09
PRKDCP78527 ELL2P4-201ENST00000446870 1376 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
PRKDCP78527 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PRKDCP78527 AC110754.1-201ENST00000399740 601 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 AL590290.1-201ENST00000405336 380 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 AC018634.1-201ENST00000437554 401 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 HMGB3P6-201ENST00000444896 598 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
PRKDCP78527 AC010620.2-201ENST00000600135 313 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.97□□□□□ -2.09
PRKDCP78527 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PRKDCP78527 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.97□□□□□ -2.09
PRKDCP78527 HMGB3P18-201ENST00000406327 590 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC1.97□□□□□ -2.09
PRKDCP78527 Z99127.2-201ENST00000441426 334 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.97□□□□□ -2.09
PRKDCP78527 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.97□□□□□ -2.09
PRKDCP78527 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.97□□□□□ -2.09
PRKDCP78527 MIR4781-201ENST00000585250 76 ntBASIC1.97□□□□□ -2.09
PRKDCP78527 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms