Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 U3.6-201ENST00000363622 211 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 RNU1-64P-201ENST00000365443 163 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS1BP61024 MIR30B-201ENST00000384850 88 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CKS1BP61024 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.34□□□□□ -2.03
CKS1BP61024 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CKS1BP61024 RAD23BP2-201ENST00000416003 1207 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS1BP61024 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.34□□□□□ -2.03
CKS1BP61024 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 AL645931.1-201ENST00000439737 410 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 RABEPKP1-201ENST00000440529 1026 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.34□□□□□ -2.03
CKS1BP61024 HSFY6P-201ENST00000445573 403 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.34□□□□□ -2.03
CKS1BP61024 AC097262.1-201ENST00000452559 548 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AC234775.1-201ENST00000454247 670 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 snoU13.7-201ENST00000459220 104 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CKS1BP61024 GAPDHP36-201ENST00000480688 918 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 SETP14-201ENST00000497538 873 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 GMPSP1-201ENST00000514075 579 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 MTCO1P35-201ENST00000515270 228 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.34□□□□□ -2.03
CKS1BP61024 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.34□□□□□ -2.03
CKS1BP61024 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS1BP61024 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.34□□□□□ -2.03
CKS1BP61024 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.34□□□□□ -2.03
CKS1BP61024 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS1BP61024 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS1BP61024 AC016252.1-201ENST00000609721 474 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AL354976.1-201ENST00000613843 387 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AC244100.1-202ENST00000621554 382 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AL354798.1-201ENST00000622505 329 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 AC079228.1-201ENST00000624774 1049 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 MIR6830-201ENST00000636015 70 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
CKS1BP61024 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CKS1BP61024 MAPK10-266ENST00000641066 6555 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CKS1BP61024 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.33□□□□□ -2.04
CKS1BP61024 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.33□□□□□ -2.04
CKS1BP61024 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
CKS1BP61024 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CKS1BP61024 RNA5SP139-201ENST00000364340 117 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 RNU6-1180P-201ENST00000364935 107 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CKS1BP61024 MIR585-201ENST00000384887 94 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CKS1BP61024 ARF4P3-201ENST00000397387 509 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 RNA5SP317-201ENST00000410176 116 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 RNA5SP311-201ENST00000411290 116 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CKS1BP61024 AL356968.1-201ENST00000416622 474 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS1BP61024 AL606495.1-201ENST00000422100 813 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 RPL7P2-201ENST00000427639 268 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.33□□□□□ -2.04
CKS1BP61024 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS1BP61024 RPL21P89-201ENST00000444021 467 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 AC008264.1-201ENST00000447612 367 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS1BP61024 RPL31P53-201ENST00000457065 348 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.33□□□□□ -2.04
CKS1BP61024 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.33□□□□□ -2.04
CKS1BP61024 AC010625.1-201ENST00000511296 403 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS1BP61024 AC108120.2-201ENST00000512973 294 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 RNA5SP315-201ENST00000516340 116 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 RPPH1-2P-201ENST00000516688 293 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 RNA5SP312-201ENST00000517068 116 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.33□□□□□ -2.04
CKS1BP61024 C1GALT1P3-201ENST00000522049 819 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.33□□□□□ -2.04
CKS1BP61024 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.33□□□□□ -2.04
CKS1BP61024 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS1BP61024 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.33□□□□□ -2.04
CKS1BP61024 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.33□□□□□ -2.04
CKS1BP61024 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CKS1BP61024 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS1BP61024 AC024560.3-201ENST00000608482 349 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 MIR7851-201ENST00000610611 160 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CKS1BP61024 AC010297.1-201ENST00000623948 149 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 AC103798.2-201ENST00000624292 632 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 AL121594.5-201ENST00000631724 573 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CKS1BP61024 AC026241.1-201ENST00000517873 2142 ntBASIC2.33□□□□□ -2.04
CKS1BP61024 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CKS1BP61024 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CKS1BP61024 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms