Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN20P56880 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLDN20P56880 AC010300.1-201ENST00000600671 5134 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CLDN20P56880 RNA5SP388-201ENST00000362584 119 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 RNU6-553P-201ENST00000364047 96 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 RNU1-132P-201ENST00000364300 164 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 SNORA74C-2-201ENST00000411179 201 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 MTCYBP38-201ENST00000417160 1123 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 RPS15AP40-201ENST00000419621 391 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.91□□□□□ -1.78
CLDN20P56880 OR4F13P-201ENST00000428478 931 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN20P56880 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 RPL39P6-201ENST00000448289 150 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 TPT1P12-201ENST00000448968 492 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN20P56880 RPL23AP35-201ENST00000451906 501 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 RPL30P6-201ENST00000475925 342 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 RPS3AP43-201ENST00000479743 781 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 RPL5P23-201ENST00000496040 868 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 AC108078.3-201ENST00000502633 489 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 RNF138P1-201ENST00000502765 546 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CLDN20P56880 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.91□□□□□ -1.78
CLDN20P56880 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 AL356057.1-201ENST00000533798 831 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 AC008127.2-201ENST00000549925 1075 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.91□□□□□ -1.78
CLDN20P56880 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN20P56880 MIR3138-201ENST00000585238 82 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AC067852.4-201ENST00000590314 478 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 AC025946.2-201ENST00000603398 234 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AL163642.2-201ENST00000604722 1019 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AC018714.1-201ENST00000605028 208 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 MIR432-201ENST00000606207 94 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AC012603.1-201ENST00000606424 528 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 AC078899.5-201ENST00000612475 178 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AC243773.3-201ENST00000613270 256 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AL021997.2-201ENST00000615674 271 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 MIR6830-201ENST00000636015 70 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 FP325313.1-201ENST00000638228 703 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLDN20P56880 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 AL049555.1-201ENST00000562834 1933 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 MTND5P24-201ENST00000438892 1767 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 AL079343.1-201ENST00000572358 1771 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 AL158163.1-201ENST00000603915 1649 ntBASIC3.91□□□□□ -1.78
CLDN20P56880 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN20P56880 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN20P56880 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.9□□□□□ -1.78
CLDN20P56880 AL445523.1-201ENST00000451184 1362 ntBASIC3.9□□□□□ -1.78
CLDN20P56880 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN20P56880 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN20P56880 FAM35DP-201ENST00000323387 2712 ntBASIC3.9□□□□□ -1.78
CLDN20P56880 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CLDN20P56880 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
CLDN20P56880 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN20P56880 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN20P56880 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN20P56880 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
CLDN20P56880 RNA5SP175-201ENST00000364275 119 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC068538.1-201ENST00000376856 336 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 OR6C69P-201ENST00000394268 893 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 SNRPEP2-201ENST00000397592 279 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 SKINT1L-201ENST00000401057 817 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 BTBD10P2-201ENST00000404779 676 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms