Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.38□□□□□ -1.71
HDAC4P56524 MLECP1-201ENST00000615893 709 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AC121761.2-201ENST00000617300 689 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 AC026634.1-201ENST00000634369 198 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 MIR4496-201ENST00000635896 61 ntBASIC4.38□□□□□ -1.71
HDAC4P56524 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC4P56524 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC4P56524 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HDAC4P56524 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC4P56524 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 ATP5F1P3-201ENST00000397213 657 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 RNU2-42P-201ENST00000410697 113 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC4P56524 MTND2P18-201ENST00000419962 1030 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.37□□□□□ -1.71
HDAC4P56524 PSMA2P3-201ENST00000429685 675 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 UBE2V1P1-201ENST00000430836 445 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC4P56524 BTF3P10-201ENST00000433415 495 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 UBE2D3P1-201ENST00000436669 444 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC4P56524 RPL23AP89-201ENST00000439324 255 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC4P56524 AL133217.1-201ENST00000450980 425 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 BX276092.4-201ENST00000452056 248 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC4P56524 RPL21P103-201ENST00000479921 488 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC4P56524 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 WBP1LP4-201ENST00000505043 344 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 SNX5P1-201ENST00000505757 1041 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AC079395.1-201ENST00000510981 262 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AC109445.1-201ENST00000512356 383 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC4P56524 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC4P56524 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC4P56524 IFITM8P-201ENST00000522529 394 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC4P56524 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 TVP23BP1-201ENST00000557500 617 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AL132657.2-201ENST00000564417 358 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AC009101.1-201ENST00000568135 242 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AC009220.3-201ENST00000604318 586 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 DPRXP5-201ENST00000604662 539 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC4P56524 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 MIR3653-201ENST00000625572 110 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 AC068620.4-201ENST00000636730 1182 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 MKKS-204ENST00000639674 192 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.37□□□□□ -1.71
HDAC4P56524 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HDAC4P56524 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC4P56524 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC4P56524 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC4P56524 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC4P56524 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HDAC4P56524 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 SNORD116-2-201ENST00000384274 95 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 SNORA70E-201ENST00000384492 135 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 SNORD116-6-201ENST00000384711 96 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 AC092634.6-201ENST00000418558 192 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AC006960.1-201ENST00000419980 153 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms