Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL365184.2-201ENST00000431139 435 ntBASIC4.06□□□□□ -1.76
CDH12P55289 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 MTND4P6-201ENST00000438297 472 ntBASIC4.06□□□□□ -1.76
CDH12P55289 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH12P55289 USP9YP29-201ENST00000445112 563 ntBASIC4.06□□□□□ -1.76
CDH12P55289 ABCF2P2-201ENST00000450549 296 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH12P55289 CEACAMP6-201ENST00000452007 574 ntBASIC4.06□□□□□ -1.76
CDH12P55289 MEMO1P3-201ENST00000459811 302 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC010326.1-201ENST00000462726 602 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC083982.1-201ENST00000485679 344 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH12P55289 AC079140.3-201ENST00000511111 550 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH12P55289 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH12P55289 AC104986.1-201ENST00000517978 436 ntBASIC4.06□□□□□ -1.76
CDH12P55289 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH12P55289 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 AP001781.1-201ENST00000530977 207 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC022880.1-201ENST00000534017 973 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH12P55289 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 AP001004.1-201ENST00000582468 324 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH12P55289 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 BNIP3P11-201ENST00000603878 563 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC019278.1-201ENST00000623516 479 ntBASIC4.06□□□□□ -1.76
CDH12P55289 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH12P55289 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH12P55289 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH12P55289 AC084035.1-201ENST00000634543 607 ntBASIC4.06□□□□□ -1.76
CDH12P55289 U6.101-201ENST00000637707 76 ntBASIC4.06□□□□□ -1.76
CDH12P55289 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH12P55289 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CDH12P55289 AC006971.1-201ENST00000407916 4486 ntBASIC4.06□□□□□ -1.76
CDH12P55289 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH12P55289 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH12P55289 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH12P55289 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 MTCO1P23-201ENST00000415223 1526 ntBASIC4.05□□□□□ -1.76
CDH12P55289 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH12P55289 AP002907.1-201ENST00000606361 1430 ntBASIC4.05□□□□□ -1.76
CDH12P55289 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 RNU6-501P-201ENST00000364072 100 ntBASIC4.05□□□□□ -1.76
CDH12P55289 SNORD74.4-201ENST00000364129 80 ntBASIC4.05□□□□□ -1.76
CDH12P55289 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 AC019155.1-201ENST00000382242 574 ntBASIC4.05□□□□□ -1.76
CDH12P55289 SNORA51.6-201ENST00000384151 125 ntBASIC4.05□□□□□ -1.76
CDH12P55289 RNU6-146P-201ENST00000384602 108 ntBASIC4.05□□□□□ -1.76
CDH12P55289 RNU6-178P-201ENST00000384631 104 ntBASIC4.05□□□□□ -1.76
CDH12P55289 MIR550A3-201ENST00000390735 95 ntBASIC4.05□□□□□ -1.76
CDH12P55289 EIF5P1-201ENST00000400019 1231 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AL023807.1-201ENST00000407932 359 ntBASIC4.05□□□□□ -1.76
CDH12P55289 RNA5SP104-201ENST00000410989 118 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH12P55289 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH12P55289 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDH12P55289 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH12P55289 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH12P55289 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 AL360081.1-201ENST00000428299 555 ntBASIC4.05□□□□□ -1.76
CDH12P55289 RPS24P1-201ENST00000438550 371 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH12P55289 BMI1P1-201ENST00000445879 941 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH12P55289 ST13P20-201ENST00000447996 1065 ntBASIC4.05□□□□□ -1.76
CDH12P55289 RPL32P9-201ENST00000487963 407 ntBASIC4.05□□□□□ -1.76
CDH12P55289 TMEM251P1-201ENST00000503717 318 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH12P55289 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH12P55289 PARP4P3-201ENST00000510265 317 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC110792.2-201ENST00000510278 224 ntBASIC4.05□□□□□ -1.76
CDH12P55289 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH12P55289 OR5M7P-201ENST00000526140 972 ntBASIC4.05□□□□□ -1.76
CDH12P55289 ZNF705CP-201ENST00000530515 889 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AP002963.1-201ENST00000530590 184 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC008127.2-201ENST00000549925 1075 ntBASIC4.05□□□□□ -1.76
CDH12P55289 CR383656.6-201ENST00000550518 394 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.05□□□□□ -1.76
CDH12P55289 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH12P55289 PCMTD1P2-201ENST00000565017 355 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC141257.3-201ENST00000572906 215 ntBASIC4.05□□□□□ -1.76
CDH12P55289 RN7SL690P-201ENST00000582087 240 ntBASIC4.05□□□□□ -1.76
CDH12P55289 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH12P55289 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.05□□□□□ -1.76
CDH12P55289 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH12P55289 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH12P55289 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms