Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 MIR4666A-201ENST00000580160 79 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.09□□□□□ -1.75
LIMK1P53667 IGHV3-29-201ENST00000604817 344 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AC105148.1-201ENST00000604961 409 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AL592436.1-201ENST00000605135 558 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AC110741.2-201ENST00000605278 268 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AC090425.2-201ENST00000608818 501 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 MIR7151-201ENST00000617477 60 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AC010975.3-201ENST00000618727 978 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 MFSD8-245ENST00000641743 948 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
LIMK1P53667 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LIMK1P53667 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LIMK1P53667 Z99496.1-201ENST00000469424 1477 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 ZNF285B-201ENST00000561698 1767 ntBASIC4.09□□□□□ -1.76
LIMK1P53667 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.09□□□□□ -1.76
LIMK1P53667 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.09□□□□□ -1.76
LIMK1P53667 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LIMK1P53667 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LIMK1P53667 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 OR4A15-201ENST00000314706 1035 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 RNU1-15P-201ENST00000353977 144 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 RNU6-839P-201ENST00000363347 108 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
LIMK1P53667 SNORA5A-201ENST00000384111 134 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 RNU6-441P-201ENST00000384545 106 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LIMK1P53667 AL121978.1-201ENST00000402778 359 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 RN7SKP156-201ENST00000410308 342 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 OR4K6P-201ENST00000416478 897 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.08□□□□□ -1.76
LIMK1P53667 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.08□□□□□ -1.76
LIMK1P53667 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AL691449.1-201ENST00000426570 421 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AC096632.1-201ENST00000427395 310 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.08□□□□□ -1.76
LIMK1P53667 SEPT7P5-201ENST00000434048 306 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 AC004854.1-201ENST00000440356 349 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AC007967.1-201ENST00000455422 1159 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 CFTRP1-201ENST00000456646 183 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.08□□□□□ -1.76
LIMK1P53667 AP000893.1-201ENST00000474462 794 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.08□□□□□ -1.76
LIMK1P53667 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.08□□□□□ -1.76
LIMK1P53667 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.08□□□□□ -1.76
LIMK1P53667 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.08□□□□□ -1.76
LIMK1P53667 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.08□□□□□ -1.76
LIMK1P53667 AP001317.1-201ENST00000531194 960 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 CYCSP30-201ENST00000546447 172 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.08□□□□□ -1.76
LIMK1P53667 AC037471.2-201ENST00000564941 598 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AC093519.1-201ENST00000566109 298 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 RPL23AP97-201ENST00000568955 471 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.08□□□□□ -1.76
LIMK1P53667 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LIMK1P53667 SNRPGP15-201ENST00000600149 222 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 NXPH1-205ENST00000602349 1953 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.08□□□□□ -1.76
LIMK1P53667 AC006023.2-201ENST00000609916 167 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.08□□□□□ -1.76
LIMK1P53667 AP000255.1-201ENST00000610276 676 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AL442067.2-201ENST00000614033 363 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.08□□□□□ -1.76
LIMK1P53667 OR1S1-201ENST00000624470 978 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AL512506.2-201ENST00000624472 458 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LIMK1P53667 AC027290.2-201ENST00000623210 18662 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 AP001486.2-201ENST00000561652 5113 ntBASIC4.08□□□□□ -1.76
LIMK1P53667 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.07□□□□□ -1.76
LIMK1P53667 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LIMK1P53667 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 SNORD116-23-201ENST00000384645 92 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 MIR183-201ENST00000384958 110 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 RNU6-328P-201ENST00000390887 106 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 SSXP10-201ENST00000402595 565 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AL139098.1-201ENST00000407291 389 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 RNU4-6P-201ENST00000410804 122 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 SNORA74C-2-201ENST00000411179 201 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 MTCO2P8-201ENST00000412213 658 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC068533.1-201ENST00000418542 415 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 RPF2P1-201ENST00000424137 906 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.07□□□□□ -1.76
LIMK1P53667 AC114973.1-201ENST00000429057 632 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms