Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSNK1A1P48729 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 GTF2IP22-201ENST00000554443 182 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 AC079148.1-201ENST00000565944 819 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 AC010735.1-201ENST00000567305 1026 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 YWHAQP7-201ENST00000603536 658 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 AC011468.4-201ENST00000603942 409 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 RMST_8.1-201ENST00000610287 165 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 MIR6798-201ENST00000612887 67 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 AL512506.1-201ENST00000613918 449 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 RMST_10.1-201ENST00000616309 154 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 U4.6-201ENST00000621618 127 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 AC024595.1-201ENST00000623088 387 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CSNK1A1P48729 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 AL161912.2-201ENST00000565707 3007 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CSNK1A1P48729 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CSNK1A1P48729 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CSNK1A1P48729 AC002546.1-201ENST00000588041 2504 ntBASIC3.13□□□□□ -1.91
CSNK1A1P48729 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL121972.1-201ENST00000402023 252 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC092745.2-202ENST00000411880 369 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL445183.3-201ENST00000414168 502 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 VDAC1P3-201ENST00000434069 851 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL662791.1-201ENST00000441992 928 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL133547.1-201ENST00000448546 220 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC008280.2-201ENST00000455473 307 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 RN7SL542P-201ENST00000467147 294 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 CYCSP20-201ENST00000473154 315 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC073522.1-201ENST00000483312 377 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 ACTG1P13-201ENST00000486987 1043 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 SETP14-201ENST00000497538 873 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 TRMT10BP1-201ENST00000519377 943 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC012182.1-201ENST00000570133 895 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC006130.2-201ENST00000586202 326 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC011492.1-201ENST00000600023 315 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC008121.2-201ENST00000614647 523 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 CR392039.5-201ENST00000623201 510 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 AL136164.4-201ENST00000625013 2135 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AP001350.1-201ENST00000601906 1524 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 AC008432.1-201ENST00000615912 1320 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CSNK1A1P48729 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.12□□□□□ -1.91
CSNK1A1P48729 MTND4P34-201ENST00000572715 1371 ntBASIC3.12□□□□□ -1.91
CSNK1A1P48729 MFSD8-233ENST00000641482 4860 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSNK1A1P48729 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 SNORD56.4-201ENST00000363883 71 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 DSTNP4-201ENST00000399472 474 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 RAB9AP3-201ENST00000412737 573 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 CRYBB2P1-203ENST00000415709 538 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 DBIP2-201ENST00000419076 262 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL158071.1-201ENST00000430315 461 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.11□□□□□ -1.91
CSNK1A1P48729 AL357552.1-201ENST00000445254 415 ntBASIC3.11□□□□□ -1.91
CSNK1A1P48729 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms