Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXD13P35453 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
HOXD13P35453 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD13P35453 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD13P35453 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
HOXD13P35453 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HOXD13P35453 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXD13P35453 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD13P35453 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXD13P35453 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD13P35453 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXD13P35453 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXD13P35453 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD13P35453 RNU6-216P-201ENST00000363282 104 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 SNORD82-201ENST00000365530 70 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 RNU6-761P-201ENST00000384148 107 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AL590084.1-201ENST00000407885 387 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 EI24P1-201ENST00000416584 867 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 AL356320.2-201ENST00000417263 507 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC244098.2-201ENST00000422068 99 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AL035246.1-201ENST00000433554 1255 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 HSFY6P-201ENST00000445573 403 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AL606517.1-201ENST00000446914 387 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 AL009048.1-201ENST00000450437 298 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AL133477.1-201ENST00000457472 514 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 PLGLA-201ENST00000465668 449 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 PABPC1P3-201ENST00000469174 459 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC078817.1-201ENST00000492623 435 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
HOXD13P35453 AC114322.1-201ENST00000506771 926 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC092593.2-201ENST00000513866 913 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 SCARNA14-201ENST00000516903 136 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 AL132657.2-201ENST00000564417 358 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXD13P35453 AC004987.4-201ENST00000603383 338 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC025946.2-201ENST00000603398 234 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC020910.2-201ENST00000603635 610 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
HOXD13P35453 MIR4727-201ENST00000622232 55 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AF001550.2-201ENST00000636643 217 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 AC138649.5-201ENST00000637456 137 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXD13P35453 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXD13P35453 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD13P35453 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
HOXD13P35453 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD13P35453 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.28□□□□□ -1.72
HOXD13P35453 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 AC109315.1-201ENST00000584143 1347 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 IPO8P1-201ENST00000455509 3109 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HOXD13P35453 AP002001.2-201ENST00000529025 1469 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 RNU4-92P-201ENST00000363783 136 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 RNU6-657P-201ENST00000383904 107 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 RNU6-730P-201ENST00000383954 104 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 RNU6-636P-201ENST00000384598 107 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 RNU6-906P-201ENST00000384700 70 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 MIR199A2-201ENST00000385289 110 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 ANAPC10P1-201ENST00000395991 556 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 ERHP2-201ENST00000402323 299 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 PPIAP31-201ENST00000405422 495 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXD13P35453 Z97055.1-201ENST00000419730 712 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXD13P35453 OR8F1P-201ENST00000425243 930 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC087650.1-201ENST00000431445 468 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 AC127537.2-201ENST00000439258 465 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC020898.1-201ENST00000474167 787 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD13P35453 RPS3AP6-201ENST00000484430 795 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXD13P35453 OR4G11P-201ENST00000492842 939 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC146944.2-203ENST00000502493 354 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC108078.3-201ENST00000502633 489 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC109458.1-201ENST00000508858 316 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC139495.1-202ENST00000513164 354 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXD13P35453 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
HOXD13P35453 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXD13P35453 AC090877.1-201ENST00000561418 344 ntBASIC4.27□□□□□ -1.73
HOXD13P35453 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms