Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 OR6C64P-201ENST00000419708 825 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 AL513043.1-201ENST00000439124 535 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 RN7SKP244-201ENST00000516513 307 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 AC243972.3-201ENST00000539655 198 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 AL158196.1-201ENST00000616786 434 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 AC092608.2-201ENST00000624427 218 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 DDX18P3-201ENST00000404856 2007 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL4A5P29400 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.24□□□□□ -1.89
COL4A5P29400 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL4A5P29400 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
COL4A5P29400 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 RPS26P40-201ENST00000435209 294 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 WASF1P1-201ENST00000447560 1131 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL4A5P29400 SEPT7P3-201ENST00000455017 621 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 AC096725.1-201ENST00000514266 313 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 IGKV3-31-201ENST00000523109 329 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.24□□□□□ -1.89
COL4A5P29400 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.24□□□□□ -1.89
COL4A5P29400 AL158827.2-201ENST00000602494 330 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 Z82195.1-201ENST00000604558 398 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.24□□□□□ -1.89
COL4A5P29400 AL691447.3-201ENST00000635020 330 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 AC022031.1-201ENST00000585985 2593 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.23□□□□□ -1.89
COL4A5P29400 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A5P29400 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A5P29400 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A5P29400 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 MIR1289-2-201ENST00000408360 111 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.23□□□□□ -1.89
COL4A5P29400 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.23□□□□□ -1.89
COL4A5P29400 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.23□□□□□ -1.89
COL4A5P29400 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 UBE2D3P1-201ENST00000436669 444 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 IFNA11P-201ENST00000446352 526 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 RPL23AP15-201ENST00000450202 459 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 AL590639.1-201ENST00000456484 337 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 RPS6P4-201ENST00000494693 758 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.23□□□□□ -1.89
COL4A5P29400 MIR2114-201ENST00000516645 80 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 FAM60DP-201ENST00000524174 632 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.23□□□□□ -1.89
COL4A5P29400 CTSLP2-204ENST00000629029 392 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.23□□□□□ -1.89
COL4A5P29400 CDC27P2-201ENST00000425026 1922 ntBASIC3.23□□□□□ -1.89
COL4A5P29400 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.23□□□□□ -1.89
COL4A5P29400 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A5P29400 AC006020.1-201ENST00000420179 1854 ntBASIC3.22□□□□□ -1.89
COL4A5P29400 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL4A5P29400 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.22□□□□□ -1.89
COL4A5P29400 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL4A5P29400 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.22□□□□□ -1.89
COL4A5P29400 AC245054.2-201ENST00000415639 319 ntBASIC3.22□□□□□ -1.89
COL4A5P29400 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.22□□□□□ -1.89
COL4A5P29400 AC005189.1-201ENST00000431286 310 ntBASIC3.22□□□□□ -1.89
COL4A5P29400 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL4A5P29400 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.22□□□□□ -1.89
COL4A5P29400 RN7SKP60-201ENST00000516985 239 ntBASIC3.22□□□□□ -1.89
COL4A5P29400 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.22□□□□□ -1.89
COL4A5P29400 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL4A5P29400 AL442163.2-201ENST00000553912 710 ntBASIC3.22□□□□□ -1.89
COL4A5P29400 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL4A5P29400 AL592295.2-201ENST00000612578 206 ntBASIC3.22□□□□□ -1.89
COL4A5P29400 AC074140.1-201ENST00000621617 208 ntBASIC3.22□□□□□ -1.89
COL4A5P29400 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL4A5P29400 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
COL4A5P29400 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
COL4A5P29400 SNORD114-30-201ENST00000364448 72 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 SNORA36C-201ENST00000384289 132 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 SKINT1L-201ENST00000401057 817 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 LAP3P1-201ENST00000403648 294 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL4A5P29400 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.21□□□□□ -1.9
COL4A5P29400 Z98742.3-201ENST00000418637 326 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 MTCO1P51-201ENST00000427672 1060 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.21□□□□□ -1.9
COL4A5P29400 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL4A5P29400 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.21□□□□□ -1.9
COL4A5P29400 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.21□□□□□ -1.9
COL4A5P29400 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.21□□□□□ -1.9
COL4A5P29400 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.21□□□□□ -1.9
COL4A5P29400 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.21□□□□□ -1.9
COL4A5P29400 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.21□□□□□ -1.9
COL4A5P29400 AC007621.1-201ENST00000604544 437 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 HSPA8P4-201ENST00000511877 1920 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
COL4A5P29400 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL4A5P29400 NEAT1-202ENST00000501122 22743 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms