Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 OR4A15-201ENST00000314706 1035 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 RNA5SP97-201ENST00000365006 84 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 RNU6-444P-201ENST00000383988 108 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 MIR16-1-201ENST00000385271 89 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 RN7SKP156-201ENST00000410308 342 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.74□□□□□ -1.81
PTPN4P29074 DBF4P1-201ENST00000412976 1892 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 OR51A3P-201ENST00000413596 924 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC008280.1-201ENST00000418851 412 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC244098.2-201ENST00000422068 99 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 RPL31P12-201ENST00000422587 358 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 HMGB1P45-201ENST00000435986 653 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 CYCSP43-201ENST00000438233 310 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN4P29074 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN4P29074 RANP8-201ENST00000444720 713 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 RPL5P24-201ENST00000463742 885 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.74□□□□□ -1.81
PTPN4P29074 AC084198.1-201ENST00000477747 402 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 ACTR3P3-201ENST00000480448 893 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 RPS27P23-201ENST00000487608 251 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
PTPN4P29074 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN4P29074 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.74□□□□□ -1.81
PTPN4P29074 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.74□□□□□ -1.81
PTPN4P29074 TRMT10BP1-201ENST00000519377 943 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.74□□□□□ -1.81
PTPN4P29074 OR5AP1P-201ENST00000529730 940 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN4P29074 MTND5P21-201ENST00000531961 522 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.74□□□□□ -1.81
PTPN4P29074 AC104072.1-201ENST00000568817 668 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN4P29074 AC022146.1-201ENST00000595307 847 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC015726.1-201ENST00000602353 681 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC133794.1-201ENST00000602731 914 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC024220.1-201ENST00000603675 484 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 AL137849.1-201ENST00000604767 169 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC091167.4-201ENST00000605079 184 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN4P29074 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPN4P29074 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 AL121772.2-201ENST00000614331 297 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 FP236240.3-201ENST00000623061 327 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPN4P29074 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
PTPN4P29074 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 MTND4P8-201ENST00000514997 1362 ntBASIC3.74□□□□□ -1.81
PTPN4P29074 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPN4P29074 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN4P29074 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN4P29074 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN4P29074 RNA5SP399-201ENST00000364003 117 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 SNORA3.3-201ENST00000408712 125 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 RNA5SP44-201ENST00000410446 133 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 MTND2P16-201ENST00000419987 799 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN4P29074 SDR42E1P3-201ENST00000438345 502 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.73□□□□□ -1.81
PTPN4P29074 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPN4P29074 HMGB3P8-201ENST00000449709 577 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPN4P29074 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC010468.1-201ENST00000461022 817 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 RPS3AP50-201ENST00000487064 803 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC118282.2-201ENST00000508739 374 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC119751.1-201ENST00000513357 765 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC016065.2-201ENST00000514530 444 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN4P29074 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN4P29074 KLKP1-201ENST00000595979 403 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 VN1R87P-201ENST00000596706 487 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 SNRPGP15-201ENST00000600149 222 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC092953.2-201ENST00000608000 699 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC103710.3-201ENST00000608157 948 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC006023.2-201ENST00000609916 167 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN4P29074 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN4P29074 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN4P29074 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PTPN4P29074 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PTPN4P29074 AF127577.6-201ENST00000623352 2191 ntBASIC3.73□□□□□ -1.81
PTPN4P29074 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN4P29074 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms