Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.06□□□□□ -1.6
ATF4P18848 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.06□□□□□ -1.6
ATF4P18848 SNRPGP15-201ENST00000600149 222 ntBASIC5.06□□□□□ -1.6
ATF4P18848 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.06□□□□□ -1.6
ATF4P18848 AP001521.2-201ENST00000608772 546 ntBASIC5.06□□□□□ -1.6
ATF4P18848 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.06□□□□□ -1.6
ATF4P18848 AC010133.1-201ENST00000615809 842 ntBASIC5.06□□□□□ -1.6
ATF4P18848 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ATF4P18848 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.06□□□□□ -1.6
ATF4P18848 AL132640.3-201ENST00000630473 177 ntBASIC5.06□□□□□ -1.6
ATF4P18848 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.06□□□□□ -1.6
ATF4P18848 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.06□□□□□ -1.6
ATF4P18848 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATF4P18848 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATF4P18848 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
ATF4P18848 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
ATF4P18848 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATF4P18848 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
ATF4P18848 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.06□□□□□ -1.6
ATF4P18848 AC011493.1-201ENST00000596753 1632 ntBASIC5.05□□□□□ -1.6
ATF4P18848 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.05□□□□□ -1.6
ATF4P18848 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ATF4P18848 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATF4P18848 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATF4P18848 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ATF4P18848 AL139276.1-201ENST00000311910 1001 ntBASIC5.05□□□□□ -1.6
ATF4P18848 RN7SKP145-201ENST00000363291 303 ntBASIC5.05□□□□□ -1.6
ATF4P18848 Y_RNA.142-201ENST00000363491 102 ntBASIC5.05□□□□□ -1.6
ATF4P18848 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF4P18848 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF4P18848 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF4P18848 RNU6-946P-201ENST00000383878 107 ntBASIC5.05□□□□□ -1.6
ATF4P18848 RNU6-1181P-201ENST00000384191 106 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AL136100.1-201ENST00000407696 330 ntBASIC5.05□□□□□ -1.6
ATF4P18848 RNU4-26P-201ENST00000410270 107 ntBASIC5.05□□□□□ -1.6
ATF4P18848 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.05□□□□□ -1.6
ATF4P18848 ARL5AP1-201ENST00000418991 388 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF4P18848 AHCYP8-201ENST00000425108 209 ntBASIC5.05□□□□□ -1.6
ATF4P18848 DUTP6-201ENST00000425573 462 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AC093106.2-201ENST00000428212 385 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF4P18848 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.05□□□□□ -1.6
ATF4P18848 AL031584.1-201ENST00000447169 754 ntBASIC5.05□□□□□ -1.6
ATF4P18848 GAPDHP27-201ENST00000447427 1020 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AL359073.1-201ENST00000448036 403 ntBASIC5.05□□□□□ -1.6
ATF4P18848 KF459542.1-201ENST00000450908 553 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AL162395.1-201ENST00000457882 422 ntBASIC5.05□□□□□ -1.6
ATF4P18848 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.05□□□□□ -1.6
ATF4P18848 RPL23AP2-201ENST00000471227 466 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.05□□□□□ -1.6
ATF4P18848 RN7SL143P-201ENST00000496780 297 ntBASIC5.05□□□□□ -1.6
ATF4P18848 RN7SKP99-201ENST00000517028 307 ntBASIC5.05□□□□□ -1.6
ATF4P18848 SNORA31.20-201ENST00000517111 133 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AC008489.1-201ENST00000524271 483 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF4P18848 RANP3-201ENST00000530970 276 ntBASIC5.05□□□□□ -1.6
ATF4P18848 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF4P18848 AC009120.3-201ENST00000563335 499 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AL390726.5-202ENST00000564800 256 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF4P18848 MIR4428-201ENST00000584884 73 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AC060780.2-201ENST00000589047 198 ntBASIC5.05□□□□□ -1.6
ATF4P18848 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF4P18848 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF4P18848 AC068831.8-201ENST00000620171 435 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AC211486.4-201ENST00000621495 113 ntBASIC5.05□□□□□ -1.6
ATF4P18848 AL353748.2-201ENST00000622148 471 ntBASIC5.05□□□□□ -1.6
ATF4P18848 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.05□□□□□ -1.6
ATF4P18848 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF4P18848 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
ATF4P18848 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
ATF4P18848 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.04□□□□□ -1.6
ATF4P18848 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
ATF4P18848 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 AC083843.3-201ENST00000623679 2186 ntBASIC5.04□□□□□ -1.6
ATF4P18848 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ATF4P18848 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 RNA5SP382-201ENST00000363355 112 ntBASIC5.04□□□□□ -1.6
ATF4P18848 Y_RNA.576-201ENST00000384781 102 ntBASIC5.04□□□□□ -1.6
ATF4P18848 SOD2P1-201ENST00000396543 562 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AC097374.1-203ENST00000400783 485 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AL133388.1-201ENST00000404509 287 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AL033519.1-201ENST00000407266 307 ntBASIC5.04□□□□□ -1.6
ATF4P18848 RN7SKP151-201ENST00000410230 316 ntBASIC5.04□□□□□ -1.6
ATF4P18848 RN7SKP29-201ENST00000410957 272 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF4P18848 SPATA20P1-201ENST00000423089 438 ntBASIC5.04□□□□□ -1.6
ATF4P18848 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF4P18848 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF4P18848 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.04□□□□□ -1.6
ATF4P18848 FABP5P13-201ENST00000452144 328 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms