Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.17□□□□□ -1.58
PTPN1P18031 AL356981.1-201ENST00000454879 684 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN1P18031 AC006511.1-201ENST00000470614 315 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 RPL31P50-201ENST00000471002 296 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 MTND1P3-201ENST00000484956 952 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 IGLV2-34-201ENST00000490007 283 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN1P18031 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN1P18031 RNU2-46P-201ENST00000517038 113 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 RNU6-1003P-201ENST00000517099 105 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 Y_RNA.719-201ENST00000517156 106 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 RPL23AP53-201ENST00000521854 457 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 ZNF705CP-201ENST00000530515 889 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AK6P1-201ENST00000540219 478 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AL049839.1-201ENST00000556151 657 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN1P18031 LARP7P2-201ENST00000575306 125 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 AC090312.1-201ENST00000580637 348 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 MIR3667-201ENST00000581025 74 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 MIR4472-2-201ENST00000582069 67 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 HMGN1P30-201ENST00000589286 268 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AC023813.4-201ENST00000607580 580 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN1P18031 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 XPOTP1-201ENST00000443317 2398 ntBASIC5.17□□□□□ -1.58
PTPN1P18031 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
PTPN1P18031 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PTPN1P18031 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PTPN1P18031 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN1P18031 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PTPN1P18031 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN1P18031 Z95331.1-201ENST00000623075 23112 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN1P18031 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PTPN1P18031 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN1P18031 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PTPN1P18031 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.16□□□□□ -1.58
PTPN1P18031 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN1P18031 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PTPN1P18031 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PTPN1P18031 RNU6-1090P-201ENST00000364065 94 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PTPN1P18031 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPN1P18031 EIF5P1-201ENST00000400019 1231 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 RNU6-195P-201ENST00000411352 109 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 MTCO1P17-201ENST00000411522 491 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC114755.2-201ENST00000413520 361 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC007738.1-201ENST00000413892 348 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN1P18031 PIGFP2-201ENST00000421400 651 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN1P18031 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 USP9YP9-201ENST00000429406 715 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 RPL35AP21-201ENST00000437667 333 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN1P18031 OR1H1P-201ENST00000448731 937 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC079448.1-201ENST00000449377 373 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN1P18031 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.16□□□□□ -1.58
PTPN1P18031 RPS23P1-201ENST00000491662 432 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN1P18031 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN1P18031 AC006390.1-201ENST00000508068 283 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 SNORA20.3-201ENST00000516880 132 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN1P18031 COX6CP8-201ENST00000522620 226 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 HSPA8P13-201ENST00000523715 472 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN1P18031 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPN1P18031 AC018552.1-201ENST00000562099 811 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 SNORA74C-1-201ENST00000580726 201 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC005730.3-201ENST00000583067 366 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 CKS1BP3-201ENST00000600888 237 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.16□□□□□ -1.58
PTPN1P18031 AC008536.2-201ENST00000607284 349 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC090948.2-201ENST00000607363 564 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN1P18031 AC099654.5-201ENST00000636479 350 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC097461.1-201ENST00000568928 2821 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.16□□□□□ -1.58
PTPN1P18031 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN1P18031 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.16□□□□□ -1.58
PTPN1P18031 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PTPN1P18031 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PTPN1P18031 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPN1P18031 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
PTPN1P18031 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN1P18031 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN1P18031 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PTPN1P18031 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN1P18031 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN1P18031 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.15□□□□□ -1.58
PTPN1P18031 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTPN1P18031 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms