Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.83□□□□□ -1.96
HMGA1P17096 AP002967.1-201ENST00000624203 539 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 ASNSP3-201ENST00000451989 1306 ntBASIC2.83□□□□□ -1.96
HMGA1P17096 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HMGA1P17096 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HMGA1P17096 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HMGA1P17096 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HMGA1P17096 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HMGA1P17096 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HMGA1P17096 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HMGA1P17096 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HMGA1P17096 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGA1P17096 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.82□□□□□ -1.96
HMGA1P17096 RNU4-82P-201ENST00000362443 140 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 RNA5SP126-201ENST00000365092 109 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 EI24P2-201ENST00000397776 1076 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGA1P17096 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGA1P17096 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGA1P17096 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGA1P17096 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGA1P17096 AC114781.4-201ENST00000513707 639 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 RNU6-1334P-201ENST00000516032 105 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 VTA1P2-201ENST00000520205 911 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 AP003102.1-201ENST00000525638 661 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGA1P17096 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGA1P17096 AC083760.1-201ENST00000589621 670 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 AC243829.7-201ENST00000633081 225 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HMGA1P17096 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HMGA1P17096 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HMGA1P17096 AC009487.2-201ENST00000420969 6821 ntBASIC2.82□□□□□ -1.96
HMGA1P17096 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HMGA1P17096 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HMGA1P17096 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 AC007342.7-201ENST00000624610 2337 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 AL359693.1-201ENST00000614959 2407 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HMGA1P17096 AL672167.1-206ENST00000356293 943 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HMGA1P17096 RNU6-178P-201ENST00000384631 104 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 MTCO3P31-201ENST00000405526 789 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 RPL7P59-201ENST00000447700 943 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HMGA1P17096 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HMGA1P17096 AC025260.1-201ENST00000548858 430 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 AP005205.1-201ENST00000563503 508 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 MIR3605-201ENST00000583214 100 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGA1P17096 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.81□□□□□ -1.96
HMGA1P17096 AC008277.2-201ENST00000605196 797 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 AC005046.1-201ENST00000608515 625 ntBASIC2.81□□□□□ -1.96
HMGA1P17096 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HMGA1P17096 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.81□□□□□ -1.96
HMGA1P17096 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HMGA1P17096 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
HMGA1P17096 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HMGA1P17096 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGA1P17096 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGA1P17096 OR5AQ1P-202ENST00000641257 1534 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGA1P17096 RPL9P7-201ENST00000330965 580 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 RNA5SP68-201ENST00000363885 119 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.8□□□□□ -1.96
HMGA1P17096 PTP4A1P5-201ENST00000420305 455 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 FTH1P6-201ENST00000430768 320 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 VDAC1P3-201ENST00000434069 851 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 TXNP1-201ENST00000441872 371 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGA1P17096 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGA1P17096 RPL21P71-201ENST00000465598 459 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 AC096725.1-201ENST00000514266 313 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 snoU109.6-201ENST00000516831 118 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HMGA1P17096 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGA1P17096 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGA1P17096 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGA1P17096 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGA1P17096 RPL23AP92-201ENST00000603609 255 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 AL713922.2-201ENST00000619384 716 ntBASIC2.8□□□□□ -1.96
HMGA1P17096 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGA1P17096 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGA1P17096 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HMGA1P17096 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGA1P17096 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HMGA1P17096 MTCO1P24-201ENST00000515438 1558 ntBASIC2.79□□□□□ -1.96
HMGA1P17096 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGA1P17096 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGA1P17096 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGA1P17096 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HMGA1P17096 MIR365B-201ENST00000362317 111 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms