Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CD44P16070 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.67□□□□□ -1.18
CD44P16070 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CD44P16070 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CD44P16070 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.67□□□□□ -1.18
CD44P16070 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CD44P16070 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CD44P16070 AC083806.2-201ENST00000617795 2685 ntBASIC7.66□□□□□ -1.18
CD44P16070 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.66□□□□□ -1.18
CD44P16070 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.66□□□□□ -1.18
CD44P16070 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.66□□□□□ -1.18
CD44P16070 AL078621.3-201ENST00000623707 2042 ntBASIC7.66□□□□□ -1.18
CD44P16070 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CD44P16070 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.66□□□□□ -1.18
CD44P16070 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CD44P16070 AL136531.3-201ENST00000624378 3658 ntBASIC7.66□□□□□ -1.18
CD44P16070 RNU6-516P-201ENST00000411381 104 ntBASIC7.66□□□□□ -1.18
CD44P16070 GAPDHP37-201ENST00000442317 968 ntBASIC7.66□□□□□ -1.18
CD44P16070 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.66□□□□□ -1.18
CD44P16070 RPS17P13-201ENST00000448974 407 ntBASIC7.66□□□□□ -1.18
CD44P16070 AL031737.1-201ENST00000450125 223 ntBASIC7.66□□□□□ -1.18
CD44P16070 AC079354.2-201ENST00000453523 154 ntBASIC7.66□□□□□ -1.18
CD44P16070 SNORA35.1-201ENST00000458908 128 ntBASIC7.66□□□□□ -1.18
CD44P16070 RPL21P41-201ENST00000459863 264 ntBASIC7.66□□□□□ -1.18
CD44P16070 RN7SL379P-201ENST00000479912 293 ntBASIC7.66□□□□□ -1.18
CD44P16070 GAPDHP38-201ENST00000503632 1002 ntBASIC7.66□□□□□ -1.18
CD44P16070 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CD44P16070 RNA5SP518-201ENST00000515957 119 ntBASIC7.66□□□□□ -1.18
CD44P16070 IGLVV-66-201ENST00000523818 341 ntBASIC7.66□□□□□ -1.18
CD44P16070 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.66□□□□□ -1.18
CD44P16070 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC7.66□□□□□ -1.18
CD44P16070 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.66□□□□□ -1.18
CD44P16070 AL109628.1-201ENST00000556877 366 ntBASIC7.66□□□□□ -1.18
CD44P16070 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC7.66□□□□□ -1.18
CD44P16070 SIGLEC31P-201ENST00000594237 551 ntBASIC7.66□□□□□ -1.18
CD44P16070 U7.2-201ENST00000607576 63 ntBASIC7.66□□□□□ -1.18
CD44P16070 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CD44P16070 uc_338.33-201ENST00000614988 170 ntBASIC7.66□□□□□ -1.18
CD44P16070 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CD44P16070 AC087894.3-201ENST00000623682 349 ntBASIC7.66□□□□□ -1.18
CD44P16070 AP001340.1-201ENST00000624405 217 ntBASIC7.66□□□□□ -1.18
CD44P16070 snoU18.1-201ENST00000629629 71 ntBASIC7.66□□□□□ -1.18
CD44P16070 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CD44P16070 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.66□□□□□ -1.18
CD44P16070 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CD44P16070 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CD44P16070 AC116667.1-201ENST00000604855 2072 ntBASIC7.66□□□□□ -1.18
CD44P16070 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.66□□□□□ -1.18
CD44P16070 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CD44P16070 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.65□□□□□ -1.18
CD44P16070 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CD44P16070 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CD44P16070 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.65□□□□□ -1.18
CD44P16070 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CD44P16070 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.65□□□□□ -1.18
CD44P16070 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.65□□□□□ -1.18
CD44P16070 RPL21P90-201ENST00000415692 466 ntBASIC7.65□□□□□ -1.18
CD44P16070 POLR2KP2-201ENST00000438155 177 ntBASIC7.65□□□□□ -1.18
CD44P16070 AC109327.2-201ENST00000448339 378 ntBASIC7.65□□□□□ -1.18
CD44P16070 Z92846.1-201ENST00000456203 268 ntBASIC7.65□□□□□ -1.18
CD44P16070 AC034236.1-201ENST00000469891 373 ntBASIC7.65□□□□□ -1.18
CD44P16070 RN7SL145P-201ENST00000469955 296 ntBASIC7.65□□□□□ -1.18
CD44P16070 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 Y_RNA.797-201ENST00000515977 94 ntBASIC7.65□□□□□ -1.18
CD44P16070 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.65□□□□□ -1.18
CD44P16070 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.65□□□□□ -1.18
CD44P16070 SALL4P7-201ENST00000555779 3120 ntBASIC7.65□□□□□ -1.18
CD44P16070 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.65□□□□□ -1.18
CD44P16070 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.65□□□□□ -1.18
CD44P16070 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CD44P16070 MIR4786-201ENST00000583954 80 ntBASIC7.65□□□□□ -1.18
CD44P16070 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC7.65□□□□□ -1.18
CD44P16070 AC092032.1-201ENST00000603090 165 ntBASIC7.65□□□□□ -1.18
CD44P16070 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.65□□□□□ -1.18
CD44P16070 AC130650.2-201ENST00000618736 2403 ntBASIC7.65□□□□□ -1.18
CD44P16070 AL161420.1-201ENST00000619393 264 ntBASIC7.65□□□□□ -1.18
CD44P16070 AP005212.3-201ENST00000619964 528 ntBASIC7.65□□□□□ -1.18
CD44P16070 CR381572.2-201ENST00000624852 397 ntBASIC7.65□□□□□ -1.18
CD44P16070 U6.95-201ENST00000636931 70 ntBASIC7.65□□□□□ -1.18
CD44P16070 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.65□□□□□ -1.19
CD44P16070 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.65□□□□□ -1.19
CD44P16070 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
CD44P16070 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.64□□□□□ -1.19
CD44P16070 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CD44P16070 AL121950.1-201ENST00000624993 2077 ntBASIC7.64□□□□□ -1.19
CD44P16070 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CD44P16070 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CD44P16070 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CD44P16070 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.64□□□□□ -1.19
CD44P16070 CYP2G2P-201ENST00000594920 1485 ntBASIC7.64□□□□□ -1.19
CD44P16070 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CD44P16070 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CD44P16070 RNU6-460P-201ENST00000391158 108 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms