Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-1046P-201ENST00000516538 107 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AP003467.2-201ENST00000520175 319 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 COX6CP8-201ENST00000522620 226 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AC093249.1-201ENST00000567049 203 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AC090312.1-201ENST00000580637 348 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AC136443.5-201ENST00000603741 370 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AC007621.1-201ENST00000604544 437 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AC090425.1-201ENST00000610007 140 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 AC134503.1-201ENST00000633048 54 ntBASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CSB-PGBD3P0DP91 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.146-201ENST00000363549 102 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 RNU1-32P-201ENST00000363937 159 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 RNA5SP90-201ENST00000364801 99 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 RNA5SP428-201ENST00000365129 132 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 NPM1P40-201ENST00000412758 733 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AL133482.1-201ENST00000415988 498 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 RPL7P54-201ENST00000438336 674 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC112498.1-201ENST00000444401 332 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 RPL23AP20-201ENST00000447965 421 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 RN7SL244P-201ENST00000493405 297 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC090453.1-201ENST00000495560 436 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC021146.2-201ENST00000504736 556 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC103851.1-201ENST00000506833 274 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 ELOCP31-201ENST00000540463 467 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 MIR3682-201ENST00000581338 84 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC008737.2-201ENST00000599446 118 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC011816.2-201ENST00000607089 556 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC009237.17-201ENST00000618111 748 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC068722.2-201ENST00000618734 544 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AP000473.2-201ENST00000602659 1537 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 AC020633.1-201ENST00000468439 2247 ntBASIC6.95□□□□□ -1.3
CSB-PGBD3P0DP91 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC097504.1-201ENST00000515103 2415 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC016769.3-201ENST00000396562 315 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 RN7SKP114-201ENST00000410327 279 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 RN7SKP58-201ENST00000411010 305 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 SPA17P1-201ENST00000416656 452 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 NCOR1P3-201ENST00000420479 303 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 MTCO2P5-201ENST00000422621 426 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 EIF1P3-201ENST00000423841 334 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 NANOGP6-201ENST00000429190 847 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 RPS3AP54-201ENST00000435535 734 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 RPL36AP15-201ENST00000444514 266 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 RPL10P17-201ENST00000453852 316 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 TRBV26-201ENST00000456572 344 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.632-201ENST00000459189 102 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC063943.1-201ENST00000465434 453 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 SNORA19.2-201ENST00000516013 114 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 RNU2-46P-201ENST00000517038 113 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AL845331.3-202ENST00000562856 261 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 MIR4737-201ENST00000583979 81 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC060780.2-201ENST00000589047 198 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 BBIP1P1-201ENST00000602999 279 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms