Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXC6P09630 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC6P09630 AP001542.2-201ENST00000593141 364 ntBASIC4.43□□□□□ -1.7
HOXC6P09630 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC6P09630 AP000238.1-201ENST00000608759 426 ntBASIC4.43□□□□□ -1.7
HOXC6P09630 AL159169.3-201ENST00000608871 561 ntBASIC4.43□□□□□ -1.7
HOXC6P09630 AC072039.2-201ENST00000608883 439 ntBASIC4.43□□□□□ -1.7
HOXC6P09630 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC6P09630 AC098679.5-201ENST00000624394 571 ntBASIC4.43□□□□□ -1.7
HOXC6P09630 AC055839.1-201ENST00000634467 498 ntBASIC4.43□□□□□ -1.7
HOXC6P09630 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXC6P09630 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC6P09630 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC6P09630 ZNF542P-204ENST00000482727 1305 ntBASIC4.43□□□□□ -1.7
HOXC6P09630 DDX18P3-201ENST00000404856 2007 ntBASIC4.43□□□□□ -1.7
HOXC6P09630 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC6P09630 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
HOXC6P09630 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXC6P09630 AL049781.1-201ENST00000623195 3585 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC6P09630 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC6P09630 METTL21EP-201ENST00000298105 713 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXC6P09630 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC6P09630 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC6P09630 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC6P09630 RNU4-31P-201ENST00000384211 141 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC6P09630 AC105402.1-201ENST00000413336 545 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 RPL7AP73-201ENST00000413490 353 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 RPS29P4-201ENST00000414733 161 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC6P09630 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC6P09630 HSPD1P21-201ENST00000436541 245 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC6P09630 HMGB1P48-201ENST00000446155 598 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 MTND2P19-201ENST00000449129 1012 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC6P09630 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC6P09630 RN7SL585P-201ENST00000470538 280 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC006517.1-201ENST00000480485 328 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 RN7SL293P-201ENST00000481765 281 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC6P09630 MTCYBP37-201ENST00000510642 1133 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC008837.2-201ENST00000513076 418 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC092747.2-201ENST00000545069 983 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXC6P09630 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXC6P09630 AC010738.1-201ENST00000604970 987 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 U3.45-201ENST00000607547 219 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC122133.1-201ENST00000613964 233 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 MIR7975-201ENST00000619350 68 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC024595.1-201ENST00000623088 387 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC007494.3-201ENST00000624660 743 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 AC119674.1-212ENST00000641155 993 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC6P09630 SEC63P2-201ENST00000503863 1939 ntBASIC4.42□□□□□ -1.7
HOXC6P09630 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC6P09630 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 MTND4P4-201ENST00000439033 1366 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC6P09630 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 AC000123.3-201ENST00000624029 4975 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 RNU1-108P-201ENST00000362556 161 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 SNORD3H-201ENST00000384486 214 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 MIR199A2-201ENST00000385289 110 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HOXC6P09630 AC093719.1-202ENST00000392735 373 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 RNU6-575P-201ENST00000411326 105 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC6P09630 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 USP9YP14-201ENST00000430663 563 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC6P09630 MTND6P18-201ENST00000439477 513 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 RPL23AP76-201ENST00000441860 458 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 AL929288.2-201ENST00000446368 407 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 AL035551.1-201ENST00000446931 348 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 SYPL1P1-201ENST00000473622 768 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 LINC00888-204ENST00000487386 421 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC6P09630 AC017037.1-201ENST00000508460 471 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 HMGN1P11-201ENST00000508668 303 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC6P09630 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC6P09630 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 RPL12P22-201ENST00000519073 490 ntBASIC4.41□□□□□ -1.7
HOXC6P09630 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC6P09630 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC6P09630 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms