Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.57□□□□□ -1.84
TPM1P09493 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM1P09493 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TPM1P09493 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.57□□□□□ -1.84
TPM1P09493 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.57□□□□□ -1.84
TPM1P09493 AL109653.1-201ENST00000603091 248 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC016877.3-201ENST00000606778 504 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AL355578.1-201ENST00000607405 1328 ntBASIC3.57□□□□□ -1.84
TPM1P09493 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.57□□□□□ -1.84
TPM1P09493 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TPM1P09493 METTL21EP-201ENST00000298105 713 ntBASIC3.56□□□□□ -1.84
TPM1P09493 AC245054.2-201ENST00000415639 319 ntBASIC3.56□□□□□ -1.84
TPM1P09493 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.56□□□□□ -1.84
TPM1P09493 FO393419.3-201ENST00000428741 282 ntBASIC3.56□□□□□ -1.84
TPM1P09493 HMGB3P6-201ENST00000444896 598 ntBASIC3.56□□□□□ -1.84
TPM1P09493 RAD1P2-201ENST00000446414 663 ntBASIC3.56□□□□□ -1.84
TPM1P09493 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.56□□□□□ -1.84
TPM1P09493 RPL21P18-201ENST00000469899 480 ntBASIC3.56□□□□□ -1.84
TPM1P09493 SYPL1P1-201ENST00000473622 768 ntBASIC3.56□□□□□ -1.84
TPM1P09493 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.56□□□□□ -1.84
TPM1P09493 AC005726.1-201ENST00000494679 427 ntBASIC3.56□□□□□ -1.84
TPM1P09493 HMGB1P22-201ENST00000505315 124 ntBASIC3.56□□□□□ -1.84
TPM1P09493 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.56□□□□□ -1.84
TPM1P09493 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.56□□□□□ -1.84
TPM1P09493 AC091488.1-201ENST00000604239 660 ntBASIC3.56□□□□□ -1.84
TPM1P09493 AL451074.6-201ENST00000608512 729 ntBASIC3.56□□□□□ -1.84
TPM1P09493 AL590282.1-201ENST00000610379 1136 ntBASIC3.56□□□□□ -1.84
TPM1P09493 AL390240.1-201ENST00000612950 384 ntBASIC3.56□□□□□ -1.84
TPM1P09493 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.56□□□□□ -1.84
TPM1P09493 AL356490.1-201ENST00000623079 479 ntBASIC3.56□□□□□ -1.84
TPM1P09493 AC127502.3-201ENST00000636170 1206 ntBASIC3.56□□□□□ -1.84
TPM1P09493 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.56□□□□□ -1.84
TPM1P09493 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.56□□□□□ -1.84
TPM1P09493 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.55□□□□□ -1.84
TPM1P09493 AC073055.1-201ENST00000456901 1621 ntBASIC3.55□□□□□ -1.84
TPM1P09493 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TPM1P09493 SNORA70.2-201ENST00000364506 135 ntBASIC3.55□□□□□ -1.84
TPM1P09493 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
TPM1P09493 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.55□□□□□ -1.84
TPM1P09493 RSL24D1P6-201ENST00000426934 401 ntBASIC3.55□□□□□ -1.84
TPM1P09493 NOTCH2P1-201ENST00000443481 624 ntBASIC3.55□□□□□ -1.84
TPM1P09493 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.55□□□□□ -1.84
TPM1P09493 MORF4L1P4-201ENST00000450245 976 ntBASIC3.55□□□□□ -1.84
TPM1P09493 AC025518.1-201ENST00000479856 347 ntBASIC3.55□□□□□ -1.84
TPM1P09493 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.55□□□□□ -1.84
TPM1P09493 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.55□□□□□ -1.84
TPM1P09493 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.55□□□□□ -1.84
TPM1P09493 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.55□□□□□ -1.84
TPM1P09493 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.55□□□□□ -1.84
TPM1P09493 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.55□□□□□ -1.84
TPM1P09493 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.55□□□□□ -1.84
TPM1P09493 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.55□□□□□ -1.84
TPM1P09493 SUMO2P14-201ENST00000604488 293 ntBASIC3.55□□□□□ -1.84
TPM1P09493 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.55□□□□□ -1.84
TPM1P09493 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.55□□□□□ -1.84
TPM1P09493 AC004925.1-201ENST00000624256 2706 ntBASIC3.55□□□□□ -1.84
TPM1P09493 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TPM1P09493 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.55□□□□□ -1.84
TPM1P09493 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TPM1P09493 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.54□□□□□ -1.84
TPM1P09493 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
TPM1P09493 MTND5P24-201ENST00000438892 1767 ntBASIC3.54□□□□□ -1.84
TPM1P09493 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TPM1P09493 SNORA56-201ENST00000383966 129 ntBASIC3.54□□□□□ -1.84
TPM1P09493 RNU6-629P-201ENST00000384061 103 ntBASIC3.54□□□□□ -1.84
TPM1P09493 RNU6-1181P-201ENST00000384191 106 ntBASIC3.54□□□□□ -1.84
TPM1P09493 SNORD17-201ENST00000390930 237 ntBASIC3.54□□□□□ -1.84
TPM1P09493 AL031121.1-201ENST00000406553 254 ntBASIC3.54□□□□□ -1.84
TPM1P09493 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.54□□□□□ -1.84
TPM1P09493 RPL7P46-201ENST00000425129 740 ntBASIC3.54□□□□□ -1.84
TPM1P09493 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.54□□□□□ -1.84
TPM1P09493 UBE2V1P1-201ENST00000430836 445 ntBASIC3.54□□□□□ -1.84
TPM1P09493 AC073063.1-201ENST00000434352 607 ntBASIC3.54□□□□□ -1.84
TPM1P09493 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.54□□□□□ -1.84
TPM1P09493 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.54□□□□□ -1.84
TPM1P09493 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TPM1P09493 AL024509.2-201ENST00000493462 493 ntBASIC3.54□□□□□ -1.84
TPM1P09493 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.54□□□□□ -1.84
TPM1P09493 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.54□□□□□ -1.84
TPM1P09493 AC005476.1-201ENST00000554427 397 ntBASIC3.54□□□□□ -1.84
TPM1P09493 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.54□□□□□ -1.84
TPM1P09493 AC007566.2-201ENST00000603642 413 ntBASIC3.54□□□□□ -1.84
TPM1P09493 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.54□□□□□ -1.84
TPM1P09493 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TPM1P09493 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TPM1P09493 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TPM1P09493 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TPM1P09493 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TPM1P09493 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TPM1P09493 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TPM1P09493 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.53□□□□□ -1.84
TPM1P09493 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.53□□□□□ -1.84
TPM1P09493 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TPM1P09493 RNU1-70P-201ENST00000362618 164 ntBASIC3.53□□□□□ -1.84
TPM1P09493 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TPM1P09493 AC068538.1-201ENST00000376856 336 ntBASIC3.53□□□□□ -1.84
TPM1P09493 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.53□□□□□ -1.84
TPM1P09493 RNA5SP129-201ENST00000410276 118 ntBASIC3.53□□□□□ -1.84
TPM1P09493 ATP5JP1-201ENST00000431631 322 ntBASIC3.53□□□□□ -1.84
TPM1P09493 YWHAZP7-201ENST00000436906 631 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms