Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.4□□□□□ -1.7
MMP3P08254 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.7
MMP3P08254 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
MMP3P08254 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MMP3P08254 MARK2P15-201ENST00000432204 2186 ntBASIC4.4□□□□□ -1.7
MMP3P08254 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
MMP3P08254 LINC01355-201ENST00000566551 5444 ntBASIC4.4□□□□□ -1.7
MMP3P08254 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MMP3P08254 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MMP3P08254 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.4□□□□□ -1.7
MMP3P08254 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 SNORD116-23-201ENST00000384645 92 ntBASIC4.4□□□□□ -1.71
MMP3P08254 MIR7-3-201ENST00000384898 110 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AL139098.1-201ENST00000407291 389 ntBASIC4.4□□□□□ -1.71
MMP3P08254 SNORA3.3-201ENST00000408712 125 ntBASIC4.4□□□□□ -1.71
MMP3P08254 PRELID3BP11-201ENST00000414230 479 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AL365203.2-201ENST00000423444 196 ntBASIC4.4□□□□□ -1.71
MMP3P08254 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.4□□□□□ -1.71
MMP3P08254 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.4□□□□□ -1.71
MMP3P08254 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.4□□□□□ -1.71
MMP3P08254 NPM1P24-201ENST00000428039 894 ntBASIC4.4□□□□□ -1.71
MMP3P08254 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.4□□□□□ -1.71
MMP3P08254 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
MMP3P08254 ELOCP10-201ENST00000440624 327 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AL591503.2-201ENST00000442314 1005 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.4□□□□□ -1.71
MMP3P08254 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.4□□□□□ -1.71
MMP3P08254 NF1P3-201ENST00000457709 450 ntBASIC4.4□□□□□ -1.71
MMP3P08254 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
MMP3P08254 AC006511.1-201ENST00000470614 315 ntBASIC4.4□□□□□ -1.71
MMP3P08254 RPL7P49-201ENST00000471402 708 ntBASIC4.4□□□□□ -1.71
MMP3P08254 LINC00888-204ENST00000487386 421 ntBASIC4.4□□□□□ -1.71
MMP3P08254 SETP14-201ENST00000497538 873 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 AC109445.1-201ENST00000512356 383 ntBASIC4.4□□□□□ -1.71
MMP3P08254 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
MMP3P08254 RNA5SP135-201ENST00000517019 125 ntBASIC4.4□□□□□ -1.71
MMP3P08254 IGLV3-26-201ENST00000520756 302 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.4□□□□□ -1.71
MMP3P08254 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 AC022968.1-201ENST00000567372 442 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AC007599.1-201ENST00000568688 1174 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AC008687.2-201ENST00000597865 520 ntBASIC4.4□□□□□ -1.71
MMP3P08254 ELOCP34-201ENST00000604436 327 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AC084782.3-201ENST00000612282 578 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AC073348.1-201ENST00000623002 331 ntBASIC4.4□□□□□ -1.71
MMP3P08254 AC124312.6-202ENST00000623624 418 ntBASIC4.4□□□□□ -1.71
MMP3P08254 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 AP004289.2-201ENST00000444413 1457 ntBASIC4.4□□□□□ -1.71
MMP3P08254 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
MMP3P08254 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.4□□□□□ -1.71
MMP3P08254 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MMP3P08254 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
MMP3P08254 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.4□□□□□ -1.71
MMP3P08254 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
MMP3P08254 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 U1.1-201ENST00000384101 164 ntBASIC4.39□□□□□ -1.71
MMP3P08254 RNU6-1200P-201ENST00000384162 107 ntBASIC4.39□□□□□ -1.71
MMP3P08254 SNORA51.12-201ENST00000384448 134 ntBASIC4.39□□□□□ -1.71
MMP3P08254 RPS24P12-201ENST00000402084 394 ntBASIC4.39□□□□□ -1.71
MMP3P08254 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.39□□□□□ -1.71
MMP3P08254 BOLA3P4-201ENST00000418151 400 ntBASIC4.39□□□□□ -1.71
MMP3P08254 OR4F13P-201ENST00000428478 931 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.39□□□□□ -1.71
MMP3P08254 VN1R108P-201ENST00000431580 830 ntBASIC4.39□□□□□ -1.71
MMP3P08254 YWHAZP7-201ENST00000436906 631 ntBASIC4.39□□□□□ -1.71
MMP3P08254 THAP5P1-201ENST00000439089 262 ntBASIC4.39□□□□□ -1.71
MMP3P08254 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.39□□□□□ -1.71
MMP3P08254 KATNBL1P3-201ENST00000443475 909 ntBASIC4.39□□□□□ -1.71
MMP3P08254 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.39□□□□□ -1.71
MMP3P08254 RPS27AP8-201ENST00000452665 445 ntBASIC4.39□□□□□ -1.71
MMP3P08254 APOOP2-201ENST00000461561 539 ntBASIC4.39□□□□□ -1.71
MMP3P08254 RPL5P24-201ENST00000463742 885 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.39□□□□□ -1.71
MMP3P08254 BZW1P2-201ENST00000473537 826 ntBASIC4.39□□□□□ -1.71
MMP3P08254 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.39□□□□□ -1.71
MMP3P08254 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.39□□□□□ -1.71
MMP3P08254 AC006499.6-201ENST00000511169 607 ntBASIC4.39□□□□□ -1.71
MMP3P08254 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.39□□□□□ -1.71
MMP3P08254 RN7SKP31-201ENST00000516354 278 ntBASIC4.39□□□□□ -1.71
MMP3P08254 RNU1-95P-201ENST00000516357 160 ntBASIC4.39□□□□□ -1.71
MMP3P08254 RNU1-128P-201ENST00000516704 160 ntBASIC4.39□□□□□ -1.71
MMP3P08254 IGKV2-23-201ENST00000518729 323 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AC026403.1-201ENST00000518938 295 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AP001207.1-201ENST00000524051 481 ntBASIC4.39□□□□□ -1.71
MMP3P08254 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.39□□□□□ -1.71
MMP3P08254 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.39□□□□□ -1.71
MMP3P08254 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.39□□□□□ -1.71
MMP3P08254 AC138915.2-201ENST00000569776 97 ntBASIC4.39□□□□□ -1.71
MMP3P08254 VN1R84P-201ENST00000593697 235 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms