Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC013356.1-201ENST00000489027 564 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.89□□□□□ -1.63
CNOT4O95628 RPS17P5-201ENST00000498293 408 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AC108043.1-201ENST00000512696 574 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.89□□□□□ -1.63
CNOT4O95628 RNU6-445P-201ENST00000516949 107 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 RNU6-1003P-201ENST00000517099 105 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.89□□□□□ -1.63
CNOT4O95628 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.89□□□□□ -1.63
CNOT4O95628 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.89□□□□□ -1.63
CNOT4O95628 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.89□□□□□ -1.63
CNOT4O95628 DEFB109D-201ENST00000529497 240 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AP003072.1-201ENST00000531740 145 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.89□□□□□ -1.63
CNOT4O95628 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.89□□□□□ -1.63
CNOT4O95628 AC122688.1-201ENST00000541494 223 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.89□□□□□ -1.63
CNOT4O95628 AC093027.1-201ENST00000546698 429 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.89□□□□□ -1.63
CNOT4O95628 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.89□□□□□ -1.63
CNOT4O95628 AL390726.5-202ENST00000564800 256 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.89□□□□□ -1.63
CNOT4O95628 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNOT4O95628 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CNOT4O95628 AC024940.4-201ENST00000605507 246 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AL512329.2-201ENST00000607350 548 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AL161734.1-201ENST00000609720 557 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.89□□□□□ -1.63
CNOT4O95628 AL132765.2-201ENST00000610812 351 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 RPSAP73-201ENST00000614820 330 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AL158801.5-201ENST00000623123 465 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 MIR4496-201ENST00000635896 61 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNOT4O95628 MUC2-202ENST00000613187 4845 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.89□□□□□ -1.63
CNOT4O95628 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNOT4O95628 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNOT4O95628 AL645937.1-201ENST00000641739 1652 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.89□□□□□ -1.63
CNOT4O95628 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 AL136964.1-201ENST00000622038 2990 ntBASIC4.89□□□□□ -1.63
CNOT4O95628 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CNOT4O95628 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNOT4O95628 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.89□□□□□ -1.63
CNOT4O95628 LINC01109-201ENST00000603837 3081 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CNOT4O95628 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 RNU6-451P-201ENST00000362921 107 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 RNA5SP507-201ENST00000363603 121 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 RNU6-289P-201ENST00000364093 107 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 MIR585-201ENST00000384887 94 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 AL645927.1-201ENST00000396783 406 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 Z97832.1-201ENST00000402490 328 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 RNU2-21P-201ENST00000410368 188 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 Y_RNA.625-201ENST00000411256 107 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 RPS12P23-201ENST00000419579 400 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.88□□□□□ -1.63
CNOT4O95628 GTF2IP20-201ENST00000431663 360 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 AC019185.1-201ENST00000442718 389 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.88□□□□□ -1.63
CNOT4O95628 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.88□□□□□ -1.63
CNOT4O95628 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.88□□□□□ -1.63
CNOT4O95628 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.88□□□□□ -1.63
CNOT4O95628 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.88□□□□□ -1.63
CNOT4O95628 RN7SL172P-201ENST00000460535 303 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 AP000893.1-201ENST00000474462 794 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 FAM172BP-201ENST00000487497 1089 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 AC023194.1-201ENST00000493084 308 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 RN7SL447P-201ENST00000494711 245 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 NIPA2P2-201ENST00000496376 1083 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNOT4O95628 AC114967.1-201ENST00000504890 259 ntBASIC4.88□□□□□ -1.63
CNOT4O95628 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.88□□□□□ -1.63
CNOT4O95628 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.88□□□□□ -1.63
CNOT4O95628 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms