Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 ZNF72P-201ENST00000425869 1908 ntBASIC6.88□□□□□ -1.31
RNF40O75150 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 AL122126.1-201ENST00000546905 1318 ntBASIC6.88□□□□□ -1.31
RNF40O75150 Y_RNA.105-201ENST00000363182 111 ntBASIC6.88□□□□□ -1.31
RNF40O75150 RNU5E-6P-201ENST00000365574 115 ntBASIC6.88□□□□□ -1.31
RNF40O75150 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RNF40O75150 SNORA16.2-201ENST00000390991 127 ntBASIC6.88□□□□□ -1.31
RNF40O75150 AC004386.1-201ENST00000393214 761 ntBASIC6.88□□□□□ -1.31
RNF40O75150 AL138885.1-201ENST00000405921 675 ntBASIC6.88□□□□□ -1.31
RNF40O75150 RNU2-33P-201ENST00000410344 192 ntBASIC6.88□□□□□ -1.31
RNF40O75150 RPL7P2-201ENST00000427639 268 ntBASIC6.88□□□□□ -1.31
RNF40O75150 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.88□□□□□ -1.31
RNF40O75150 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.88□□□□□ -1.31
RNF40O75150 UBE2V1P13-201ENST00000436983 439 ntBASIC6.88□□□□□ -1.31
RNF40O75150 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF40O75150 RAC1P7-201ENST00000445367 377 ntBASIC6.88□□□□□ -1.31
RNF40O75150 TRBV26-201ENST00000456572 344 ntBASIC6.88□□□□□ -1.31
RNF40O75150 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF40O75150 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 AC093870.1-201ENST00000506837 213 ntBASIC6.88□□□□□ -1.31
RNF40O75150 AC018797.1-201ENST00000510791 255 ntBASIC6.88□□□□□ -1.31
RNF40O75150 RNU4-71P-201ENST00000516258 113 ntBASIC6.88□□□□□ -1.31
RNF40O75150 Y_RNA.683-201ENST00000516508 93 ntBASIC6.88□□□□□ -1.31
RNF40O75150 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RNF40O75150 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF40O75150 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF40O75150 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF40O75150 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF40O75150 OR4H6P-201ENST00000563771 921 ntBASIC6.88□□□□□ -1.31
RNF40O75150 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF40O75150 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.88□□□□□ -1.31
RNF40O75150 AC091133.5-201ENST00000603088 301 ntBASIC6.88□□□□□ -1.31
RNF40O75150 RPL23AP92-201ENST00000603609 255 ntBASIC6.88□□□□□ -1.31
RNF40O75150 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.88□□□□□ -1.31
RNF40O75150 AL049794.2-201ENST00000616301 365 ntBASIC6.88□□□□□ -1.31
RNF40O75150 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.88□□□□□ -1.31
RNF40O75150 CYP3A51P-201ENST00000633513 256 ntBASIC6.88□□□□□ -1.31
RNF40O75150 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RNF40O75150 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RNF40O75150 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF40O75150 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF40O75150 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF40O75150 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF40O75150 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF40O75150 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF40O75150 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF40O75150 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF40O75150 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF40O75150 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
RNF40O75150 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
RNF40O75150 MIR323B-201ENST00000385269 82 ntBASIC6.87□□□□□ -1.31
RNF40O75150 RNU6-493P-201ENST00000391321 108 ntBASIC6.87□□□□□ -1.31
RNF40O75150 AL359694.1-201ENST00000403247 604 ntBASIC6.87□□□□□ -1.31
RNF40O75150 CYCSP17-201ENST00000407870 315 ntBASIC6.87□□□□□ -1.31
RNF40O75150 RNU6-387P-201ENST00000411331 105 ntBASIC6.87□□□□□ -1.31
RNF40O75150 RPL30P2-201ENST00000414021 291 ntBASIC6.87□□□□□ -1.31
RNF40O75150 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF40O75150 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF40O75150 RPL21P38-201ENST00000418090 167 ntBASIC6.87□□□□□ -1.31
RNF40O75150 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF40O75150 AL353597.2-202ENST00000434901 373 ntBASIC6.87□□□□□ -1.31
RNF40O75150 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF40O75150 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF40O75150 CYCSP34-201ENST00000458172 304 ntBASIC6.87□□□□□ -1.31
RNF40O75150 RPL7AP23-201ENST00000482625 776 ntBASIC6.87□□□□□ -1.31
RNF40O75150 RNU6-685P-201ENST00000517088 95 ntBASIC6.87□□□□□ -1.31
RNF40O75150 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF40O75150 AC084121.1-201ENST00000533882 835 ntBASIC6.87□□□□□ -1.31
RNF40O75150 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF40O75150 AL121576.1-201ENST00000556055 276 ntBASIC6.87□□□□□ -1.31
RNF40O75150 AC026826.3-201ENST00000561747 158 ntBASIC6.87□□□□□ -1.31
RNF40O75150 AP003115.1-201ENST00000569849 463 ntBASIC6.87□□□□□ -1.31
RNF40O75150 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF40O75150 U2.17-201ENST00000611454 95 ntBASIC6.87□□□□□ -1.31
RNF40O75150 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF40O75150 SNORA16A-202ENST00000628458 135 ntBASIC6.87□□□□□ -1.31
RNF40O75150 DDX18P3-201ENST00000404856 2007 ntBASIC6.87□□□□□ -1.31
RNF40O75150 AC107081.3-201ENST00000612715 2034 ntBASIC6.87□□□□□ -1.31
RNF40O75150 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
RNF40O75150 LINC01613-201ENST00000561476 2780 ntBASIC6.87□□□□□ -1.31
RNF40O75150 AC092724.1-201ENST00000624623 3397 ntBASIC6.87□□□□□ -1.31
RNF40O75150 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF40O75150 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms