Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC245291.3-201ENST00000443400 292 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 RPS15AP27-201ENST00000449183 343 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 AL162739.1-201ENST00000450606 307 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 AC092647.2-201ENST00000452998 253 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 TRBV26-201ENST00000456572 344 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 SNORD5.1-201ENST00000458800 75 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 HMGN1P16-201ENST00000508308 283 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 RNU6-1332P-201ENST00000516666 104 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 RNU6-255P-201ENST00000516957 105 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ACTN4O43707 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.85□□□□□ -1.31
ACTN4O43707 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.85□□□□□ -1.31
ACTN4O43707 MIR5010-201ENST00000582846 120 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.85□□□□□ -1.31
ACTN4O43707 MIR5692C1-201ENST00000585309 91 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 AL021918.2-201ENST00000613415 194 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 MIR6774-201ENST00000614651 70 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 CYP3A51P-201ENST00000633513 256 ntBASIC6.85□□□□□ -1.31
ACTN4O43707 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
ACTN4O43707 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
ACTN4O43707 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
ACTN4O43707 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ACTN4O43707 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.85□□□□□ -1.31
ACTN4O43707 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
ACTN4O43707 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ACTN4O43707 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ACTN4O43707 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
ACTN4O43707 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.84□□□□□ -1.31
ACTN4O43707 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.84□□□□□ -1.31
ACTN4O43707 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.84□□□□□ -1.31
ACTN4O43707 RNA5SP258-201ENST00000362750 119 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 SNORD113-1-201ENST00000365321 69 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 SNORA24.1-201ENST00000384401 135 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 RNU6-306P-201ENST00000384617 107 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 SNORA41-201ENST00000384675 132 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AL136372.1-201ENST00000403060 228 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 RNU2-71P-201ENST00000411395 189 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC096664.2-201ENST00000411843 406 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC114491.1-201ENST00000416095 246 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 RAC1P3-201ENST00000416129 580 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.84□□□□□ -1.31
ACTN4O43707 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 USP9YP30-201ENST00000430729 455 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ACTN4O43707 MRPS18BP2-201ENST00000434310 759 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 RPL36AP6-201ENST00000435770 321 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC064862.5-201ENST00000440618 334 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.84□□□□□ -1.31
ACTN4O43707 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 RAC1P7-201ENST00000445367 377 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC099670.1-201ENST00000455141 783 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 RPL9P32-201ENST00000464118 620 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 PPP1R11P1-201ENST00000486095 376 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC026979.1-201ENST00000492525 396 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 AC016559.2-201ENST00000510759 359 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 SNORA25.11-201ENST00000515935 105 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 SNORA40.15-201ENST00000516884 107 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 AC100784.1-201ENST00000522790 310 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 AC068446.3-201ENST00000555285 382 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC024619.4-201ENST00000580924 316 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC012433.1-201ENST00000588916 398 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AC119403.2-201ENST00000590960 598 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.84□□□□□ -1.31
ACTN4O43707 HMGB1P50-201ENST00000605814 607 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.84□□□□□ -1.31
ACTN4O43707 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.84□□□□□ -1.31
ACTN4O43707 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.84□□□□□ -1.31
ACTN4O43707 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.84□□□□□ -1.31
ACTN4O43707 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
ACTN4O43707 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
ACTN4O43707 BDP1P-201ENST00000582658 1990 ntBASIC6.84□□□□□ -1.32
ACTN4O43707 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.32
ACTN4O43707 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
ACTN4O43707 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
ACTN4O43707 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
ACTN4O43707 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.84□□□□□ -1.32
ACTN4O43707 AC007159.1-201ENST00000566529 4706 ntBASIC6.84□□□□□ -1.32
ACTN4O43707 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.83□□□□□ -1.32
ACTN4O43707 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.83□□□□□ -1.32
ACTN4O43707 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.83□□□□□ -1.32
ACTN4O43707 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
ACTN4O43707 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ACTN4O43707 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ACTN4O43707 Y_RNA.20-201ENST00000362479 113 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 SNORD62.1-201ENST00000362541 86 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 RNA5SP110-201ENST00000362638 115 ntBASIC6.83□□□□□ -1.32
ACTN4O43707 SNORD27-201ENST00000363981 72 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms