Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 DUXAP8-207ENST00000456786 622 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 PLGLA-201ENST00000465668 449 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC188H7C350 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC188H7C350 AC093767.1-201ENST00000504523 156 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 RAC1P2-201ENST00000511164 579 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC188H7C350 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 AC087808.1-201ENST00000520501 361 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 OR7E13P-201ENST00000526052 910 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC188H7C350 AC090502.2-201ENST00000549267 280 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC188H7C350 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC188H7C350 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 IPO5P1-202ENST00000600039 287 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 DUXAP10-204ENST00000612052 616 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 CYCSP41-201ENST00000616920 296 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AC004943.3-201ENST00000624116 600 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AC092184.1-201ENST00000625042 715 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC188H7C350 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC188H7C350 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC188H7C350 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CCDC188H7C350 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC188H7C350 AL359893.1-201ENST00000447628 1580 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC095050.2-201ENST00000510748 1458 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC106871.1-201ENST00000568324 3102 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC188H7C350 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC188H7C350 RNU5D-1-201ENST00000363299 116 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 SNORA62-201ENST00000365493 153 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 SUGT1P1-201ENST00000379514 476 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 RNU6-837P-201ENST00000391056 108 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 Z97055.1-201ENST00000419730 712 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AL691449.1-201ENST00000426570 421 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC068287.1-201ENST00000430283 295 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC016712.1-201ENST00000431088 378 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 TBCAP1-201ENST00000436520 327 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 GTF2IP7-202ENST00000436677 309 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 SNORA71B-202ENST00000439232 272 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC092155.2-201ENST00000454675 477 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC092757.1-201ENST00000467293 467 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 RN7SL385P-201ENST00000468873 276 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 RPL23AP44-201ENST00000482216 473 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 RPS3AP6-201ENST00000484430 795 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 SETP14-201ENST00000497538 873 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC188H7C350 ARL2BPP6-201ENST00000512757 439 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 RNA5SP208-201ENST00000516156 78 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AP001207.2-201ENST00000519490 539 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC027309.2-201ENST00000520566 192 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC188H7C350 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC188H7C350 C1GALT1P3-201ENST00000522049 819 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 MIR4425-201ENST00000580572 84 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 RN7SL600P-201ENST00000581811 299 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC107982.3-201ENST00000584957 985 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC068790.4-201ENST00000602474 263 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC011458.1-201ENST00000604034 617 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 DPRXP5-201ENST00000604662 539 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 AC009318.4-201ENST00000620496 486 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 PRO1804-201ENST00000623780 2050 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC188H7C350 AC130650.2-201ENST00000618736 2403 ntBASIC3.94□□□□□ -1.78
CCDC188H7C350 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CCDC188H7C350 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC188H7C350 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC188H7C350 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC188H7C350 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms