Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ISCUP1-201ENST00000454451 448 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 RPS15AP17-201ENST00000470598 390 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AP000893.1-201ENST00000474462 794 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 POU5F1P7-201ENST00000508759 541 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AC105233.3-201ENST00000531125 744 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AP004247.1-201ENST00000531556 1289 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AC087883.1-201ENST00000551882 391 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AC009063.1-201ENST00000563342 702 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 BNIP3P23-201ENST00000599655 511 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AL133338.2-201ENST00000604292 736 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 HSPE1P14-201ENST00000605812 302 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AL603839.4-201ENST00000624658 1005 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AC093591.3-201ENST00000634516 308 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 GDI2P1-201ENST00000429312 1336 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 ZNF137P-201ENST00000456718 1920 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AP000756.2-201ENST00000624168 2567 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 AL592148.3-201ENST00000608771 2646 ntBASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPDC1A2A3K4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC012020.1-201ENST00000624541 1728 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC108467.2-201ENST00000617640 1597 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 DCAF13P1-201ENST00000495256 1330 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 RNU6-259P-201ENST00000383999 107 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC099336.2-201ENST00000422457 254 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 RPL21P91-201ENST00000429231 479 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 RPL23AP16-201ENST00000441715 421 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 RPS26P56-201ENST00000444468 240 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 MTCO1P27-201ENST00000448269 226 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AL162591.2-201ENST00000449634 317 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC099560.2-201ENST00000457554 255 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 DEFB109F-201ENST00000491870 277 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC007016.1-201ENST00000512110 244 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 PAICSP4-201ENST00000517543 1253 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AP002748.2-201ENST00000528671 348 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 HSPE1P3-201ENST00000559254 309 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 MIR5186-201ENST00000577504 120 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AP005119.2-201ENST00000579735 1105 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC083809.1-201ENST00000615051 472 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AL121890.2-201ENST00000617644 465 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC095031.1-201ENST00000623685 672 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 AC104260.2-201ENST00000623551 3497 ntBASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPDC1A2A3K4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 RNA5SP447-201ENST00000363749 119 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 MIR195-201ENST00000385194 87 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 U8.14-201ENST00000390843 143 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 Z98745.1-201ENST00000402553 494 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 ARPC3P5-201ENST00000448802 534 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms