Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.63□□□□□ -1.99
TRAV27A0A087WT01 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRAV27A0A087WT01 AC007256.1-201ENST00000392253 2765 ntBASIC2.63□□□□□ -1.99
TRAV27A0A087WT01 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TRAV27A0A087WT01 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 MIR153-1-201ENST00000384914 90 ntBASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 NPM1P49-201ENST00000448027 714 ntBASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AC034236.1-201ENST00000469891 373 ntBASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 RPL21P18-201ENST00000469899 480 ntBASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 POU5F1P7-201ENST00000508759 541 ntBASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.62□□□□□ -1.99
TRAV27A0A087WT01 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 SNORA38.1-201ENST00000364172 131 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 MIR512-1-201ENST00000384913 84 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 SMC4P1-201ENST00000414479 527 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 TRGV7-201ENST00000427089 353 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AL662791.1-201ENST00000441992 928 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 RPL27AP5-201ENST00000469428 449 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 RN7SL807P-201ENST00000470923 297 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AL358832.1-201ENST00000497800 389 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 OR4U1P-201ENST00000554958 912 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 MIR4444-1-201ENST00000581696 74 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 MIR4444-2-201ENST00000584390 74 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AC006116.7-201ENST00000590141 756 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AC007620.3-201ENST00000608131 497 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AC139769.3-201ENST00000618383 175 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AC091953.5-201ENST00000622919 233 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAV27A0A087WT01 AL157700.1-201ENST00000561973 1432 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 RNF6P1-201ENST00000444889 1784 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AL390023.1-201ENST00000428836 262 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 UBE2V1P1-201ENST00000430836 445 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 BX510359.1-201ENST00000456973 237 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 MTATP6P22-201ENST00000507369 598 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 PTGES3P3-201ENST00000511479 482 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 PTP4A1P6-201ENST00000531034 478 ntBASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAV27A0A087WT01 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms