Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 MTND5P29-201ENST00000458676 1807 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC134882.1-201ENST00000603738 1676 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC092162.3-201ENST00000624511 1624 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 RNA5SP502-201ENST00000362694 119 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 MIR195-201ENST00000385194 87 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 GSTM3P2-201ENST00000412746 530 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 PGBD4P8-201ENST00000412993 562 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC004022.2-201ENST00000413824 193 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 RPL6P29-201ENST00000414863 865 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 MTCO3P1-205ENST00000422088 832 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AL158073.1-201ENST00000426848 1104 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 RPS26P47-201ENST00000427219 348 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 MTND4P6-201ENST00000438297 472 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 NDUFA5P7-201ENST00000452914 242 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 RNU6-1218P-201ENST00000458990 108 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC053481.1-201ENST00000467217 306 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 PRELID3BP7-201ENST00000503606 469 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC090071.1-201ENST00000507713 644 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 PARP4P3-201ENST00000510265 317 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 VWA8P1-201ENST00000510889 176 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC087477.6-201ENST00000559595 843 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 ZNF415P1-201ENST00000582279 1166 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC022146.1-201ENST00000595307 847 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AL031775.1-201ENST00000607014 887 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC106028.5-201ENST00000610332 395 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC055839.1-201ENST00000634467 498 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC006927.3-201ENST00000638789 384 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AL391684.1-202ENST00000641293 1636 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 PHKBP1-201ENST00000450951 1951 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 AC025125.1-201ENST00000624743 1922 ntBASIC4.82□□□□□ -1.64
SSX2IPQ9Y2D8 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 OR5P1P-201ENST00000299512 925 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 RNA5SP479-201ENST00000364858 117 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 Y_RNA.302-201ENST00000364997 102 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 RNA5SP366-201ENST00000365454 123 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 HDGFP1-201ENST00000405943 252 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AL136133.1-201ENST00000413694 376 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 FCF1P2-201ENST00000415284 583 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 MTCO1P21-201ENST00000416634 589 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 RPS20P1-201ENST00000434853 354 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC092013.1-201ENST00000438795 332 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC092641.1-201ENST00000440229 772 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC114755.5-201ENST00000447760 831 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 OR6C5P-201ENST00000452388 923 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 ZNF114P1-201ENST00000453500 292 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 UQCRHP4-201ENST00000471686 272 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC091167.1-201ENST00000492017 396 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 AC006499.5-201ENST00000505037 514 ntBASIC4.81□□□□□ -1.64
SSX2IPQ9Y2D8 HMGB1P28-201ENST00000507778 552 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms