Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 GTF2IP12-201ENST00000456547 356 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC104689.1-201ENST00000473356 768 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 TMED11P-201ENST00000479478 690 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC078817.1-201ENST00000492623 435 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 RPL5P23-201ENST00000496040 868 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 MIR2276-201ENST00000516886 89 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 RN7SKP283-201ENST00000517197 270 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 PTP4A1P6-201ENST00000531034 478 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC090312.2-201ENST00000582687 378 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC006116.10-201ENST00000591836 581 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC243756.2-201ENST00000618406 463 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 CR392039.5-201ENST00000623201 510 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AL356863.1-201ENST00000623378 1080 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AP002371.2-201ENST00000624450 503 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 GABPAP-201ENST00000419271 1356 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 AC090337.1-201ENST00000579651 2074 ntBASIC3.21□□□□□ -1.9
TRAPPC4Q9Y296 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 SEPT7P7-201ENST00000420492 1301 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC119744.1-201ENST00000454746 1715 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AL359837.1-201ENST00000381357 287 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 SNORA5A-201ENST00000384111 134 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 PPIAP3-201ENST00000450588 505 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 RPS20P32-201ENST00000456044 356 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AL672167.3-201ENST00000465951 960 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 RN7SL594P-201ENST00000470590 287 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC084357.1-201ENST00000473404 255 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC106707.2-201ENST00000484182 374 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC092902.1-201ENST00000486999 259 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC005726.1-201ENST00000494679 427 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 RNU2-58P-201ENST00000516403 183 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC139103.1-201ENST00000534696 1030 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC095057.3-201ENST00000567102 1157 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC090079.2-201ENST00000575289 768 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 RN7SL622P-201ENST00000585292 275 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 MTATP6P2-201ENST00000603319 678 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 BNIP3P19-201ENST00000605397 577 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AP005229.2-201ENST00000609980 697 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 AC119674.1-207ENST00000641355 633 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 NSRP1P1-201ENST00000444067 1693 ntBASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAPPC4Q9Y296 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AL592494.2-201ENST00000425455 1548 ntBASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AC007656.2-201ENST00000624902 4547 ntBASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AC007496.3-201ENST00000624987 3443 ntBASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 MIR153-1-201ENST00000384914 90 ntBASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AC004987.3-201ENST00000413879 771 ntBASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 SYF2P2-201ENST00000417620 583 ntBASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AC068533.1-201ENST00000418542 415 ntBASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.19□□□□□ -1.9
TRAPPC4Q9Y296 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms