Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 OOSP1P2-201ENST00000579644 351 ntBASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SHANK2Q9UPX8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 RNA5SP274-201ENST00000410484 108 ntBASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 AL445213.1-201ENST00000412589 747 ntBASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 UQCRHP3-201ENST00000451503 251 ntBASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 RN7SL633P-201ENST00000488974 297 ntBASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 ANXA2P1-201ENST00000505539 926 ntBASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 SNORA64.4-201ENST00000516632 81 ntBASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 MIR4644-201ENST00000579929 84 ntBASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHANK2Q9UPX8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 FAM133CP-201ENST00000332869 704 ntBASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 MIR196B-201ENST00000384852 84 ntBASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 AC105402.2-201ENST00000438503 358 ntBASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 AC106872.2-201ENST00000494303 480 ntBASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 IGKV2D-23-201ENST00000518179 286 ntBASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 AP000919.1-202ENST00000581139 1264 ntBASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK2Q9UPX8 AC105402.1-201ENST00000413336 545 ntBASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 AC245054.2-201ENST00000415639 319 ntBASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 FTH1P6-201ENST00000430768 320 ntBASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 AC021205.1-201ENST00000468797 348 ntBASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 SCGB1D5P-201ENST00000515134 247 ntBASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 RN7SKP244-201ENST00000516513 307 ntBASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 AF186190.1-201ENST00000517470 480 ntBASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK2Q9UPX8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 MIR764-201ENST00000390811 85 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 RPL31P1-201ENST00000398116 372 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 RPL31P13-201ENST00000484151 370 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 RNU6-1231P-201ENST00000517185 103 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AC092079.1-201ENST00000558620 1985 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AC107081.3-201ENST00000612715 2034 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 IPMKP1-201ENST00000425988 855 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 ARL5AP4-201ENST00000430731 512 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AP001025.2-201ENST00000490908 477 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AC079089.3-201ENST00000603094 673 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 AC008121.2-201ENST00000614647 523 ntBASIC4.24□□□□□ -1.73
SHANK2Q9UPX8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 ZNF658B-202ENST00000615961 3375 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 AC022031.1-201ENST00000585985 2593 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 RNU6-805P-201ENST00000365643 106 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 AL138827.1-201ENST00000402666 306 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 MIR1183-201ENST00000408856 89 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 AC005189.1-201ENST00000431286 310 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 CBX1P4-201ENST00000439415 457 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 IFNA11P-201ENST00000446352 526 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 AL139286.1-201ENST00000604465 483 ntBASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SHANK2Q9UPX8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 U8.2-201ENST00000363156 134 ntBASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 AL139039.1-201ENST00000401900 692 ntBASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 SNORA3.2-201ENST00000408221 125 ntBASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 ISCA1P6-201ENST00000427740 390 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms