Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 U3.20-201ENST00000390909 217 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 Y_RNA.626-201ENST00000411288 95 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 BX276092.3-201ENST00000424182 230 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 RPL36AP13-201ENST00000457490 317 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AC087385.1-201ENST00000475062 312 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AL451044.1-201ENST00000604867 238 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AC141002.1-201ENST00000607025 279 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AC006023.2-201ENST00000609916 167 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 AC073592.6-201ENST00000624271 415 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 BX322639.1-202ENST00000423987 2213 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 BDP1P-201ENST00000582658 1990 ntBASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 EIF2AP4-201ENST00000424793 1781 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 SNORA24.1-201ENST00000384401 135 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC007568.1-201ENST00000422912 471 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 ELOCP18-201ENST00000434209 337 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC008267.6-201ENST00000441664 139 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 COX6CP14-201ENST00000469580 174 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC117503.1-201ENST00000472241 394 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 RPL7P47-201ENST00000497299 556 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 RNA5SP170-201ENST00000517150 101 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 RNA5SP400-201ENST00000517155 111 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 IGLVIV-64-201ENST00000518581 301 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC020916.2-201ENST00000591242 360 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 RBMY1HP-201ENST00000382759 1389 ntBASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM35Q9UPQ4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC090740.1-201ENST00000623193 2262 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RNU6-28P-201ENST00000362378 107 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 Y_RNA.76-201ENST00000362931 109 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 Y_RNA.343-201ENST00000365354 112 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 Y_RNA.399-201ENST00000383955 105 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RNU6-1207P-201ENST00000384343 107 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AL590290.1-201ENST00000405336 380 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 SNORA77.2-201ENST00000408571 112 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RPL21P109-201ENST00000422213 475 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RPL7AP14-201ENST00000424041 802 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 FAR2P4-202ENST00000425399 584 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC108734.1-201ENST00000439549 399 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 PRDX3P3-201ENST00000447765 522 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RPL23AP71-201ENST00000470966 469 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AL161747.1-201ENST00000480068 358 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC069499.1-201ENST00000489433 509 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RNU6-1334P-201ENST00000516032 105 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 COX6B1P6-201ENST00000522347 255 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC130365.2-201ENST00000525882 1201 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms