Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 TGIF1P1-201ENST00000558095 802 ntBASIC4.1□□□□□ -1.75
CTNNA3Q9UI47 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.1□□□□□ -1.75
CTNNA3Q9UI47 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.1□□□□□ -1.75
CTNNA3Q9UI47 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.1□□□□□ -1.75
CTNNA3Q9UI47 MIR3651-201ENST00000630427 90 ntBASIC4.1□□□□□ -1.75
CTNNA3Q9UI47 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.1□□□□□ -1.75
CTNNA3Q9UI47 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CTNNA3Q9UI47 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.1□□□□□ -1.75
CTNNA3Q9UI47 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AL513302.2-201ENST00000562313 1842 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 RNU6-1293P-201ENST00000384077 107 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 MIR142-201ENST00000384835 87 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 XKRYP4-201ENST00000414395 483 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 HMGB1P48-201ENST00000446155 598 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AL590399.6-201ENST00000446396 307 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 XKRYP5-201ENST00000449659 483 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 RPL12P26-201ENST00000452430 487 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC006539.3-201ENST00000454258 129 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC025518.1-201ENST00000479856 347 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 RN7SKP57-201ENST00000517248 293 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AP001636.2-201ENST00000525517 696 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC004923.2-201ENST00000529649 369 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AL389895.1-201ENST00000554127 252 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 RNU6-156P-201ENST00000621869 107 ntBASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTNNA3Q9UI47 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
CTNNA3Q9UI47 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CTNNA3Q9UI47 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CTNNA3Q9UI47 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
CTNNA3Q9UI47 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CTNNA3Q9UI47 RNU4-35P-201ENST00000362588 141 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 MIR607-201ENST00000385241 96 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 EIF5P1-201ENST00000400019 1231 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 HMGB1P13-201ENST00000406019 642 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 MIR1303-201ENST00000408625 86 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AL445528.1-201ENST00000426330 420 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AC097713.2-201ENST00000430199 356 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 MRPS33P4-201ENST00000434892 317 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AC097262.1-201ENST00000452559 548 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 snoU13.7-201ENST00000459220 104 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 CYCSP20-201ENST00000473154 315 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 RN7SL442P-201ENST00000473804 320 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 FCF1P8-201ENST00000510322 597 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 RPL7L1P13-201ENST00000511702 739 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 MTCO1P24-201ENST00000515438 1558 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 MIR4513-201ENST00000581077 86 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AC067852.3-201ENST00000589177 561 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AC011468.4-201ENST00000603942 409 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 AL359535.1-201ENST00000612100 1087 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 MIR7153-201ENST00000637758 57 ntBASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTNNA3Q9UI47 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 AL356274.2-201ENST00000624379 3752 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 RNU6-600P-201ENST00000362524 99 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 BTBD10P2-201ENST00000404779 676 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 EI24P1-201ENST00000416584 867 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 AC023128.2-201ENST00000420880 1223 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 ARF4P2-201ENST00000430209 526 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 BX679664.1-201ENST00000434429 253 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 MTND2P21-201ENST00000436242 1042 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 AC008264.1-201ENST00000447612 367 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 RPL23AP44-201ENST00000482216 473 ntBASIC4.07□□□□□ -1.76
CTNNA3Q9UI47 RPL31P13-201ENST00000484151 370 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms