Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC006065.5-201ENST00000623427 349 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC020923.1-201ENST00000624021 917 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 FRG1CP-201ENST00000358464 769 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 RNU4-35P-201ENST00000362588 141 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 RNU6-1005P-201ENST00000384519 107 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 SNORA40.4-201ENST00000390971 128 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC007390.1-201ENST00000415722 356 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 RPS7P15-201ENST00000415804 584 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC093422.3-201ENST00000428506 305 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 RN7SL330P-201ENST00000469709 307 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC005351.1-201ENST00000511152 786 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC023141.12-201ENST00000512399 199 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 RN7SKP60-201ENST00000516985 239 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 NDUFB9P3-201ENST00000521269 501 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC010306.1-201ENST00000523223 1117 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC083923.1-201ENST00000523708 376 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 OSBPL9P3-201ENST00000534523 595 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 MIR5186-201ENST00000577504 120 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AL391001.1-201ENST00000602747 715 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AL355816.2-201ENST00000610049 647 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 MIR6864-201ENST00000617935 70 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 AL445493.3-201ENST00000619568 477 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 MIR4278-201ENST00000636094 69 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 RIOK3P1-201ENST00000418778 1528 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 MFSD8-213ENST00000641134 1327 ntBASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP2Q9UDT6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 SEC63P2-201ENST00000503863 1939 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AL592494.2-201ENST00000425455 1548 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 ENSAP3-201ENST00000312710 333 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC234772.1-201ENST00000377927 937 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 SNORA70E-201ENST00000384492 135 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 SNORD17-201ENST00000390930 237 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 SNORA11.1-201ENST00000408133 129 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 RN7SKP53-201ENST00000411337 315 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC069218.2-201ENST00000411665 344 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC092745.2-202ENST00000411880 369 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AL121882.1-201ENST00000422893 417 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 RPL21P110-201ENST00000433345 446 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 RPS4XP10-201ENST00000465034 731 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC146507.1-201ENST00000468335 354 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC078817.1-201ENST00000492623 435 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 RPL5P23-201ENST00000496040 868 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 WBP1LP4-201ENST00000505043 344 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 RN7SKP283-201ENST00000517197 270 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 HIGD1AP10-201ENST00000527837 282 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 MIR3186-201ENST00000577404 85 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC090312.2-201ENST00000582687 378 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AC112503.1-201ENST00000608436 391 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AL159169.3-201ENST00000608871 561 ntBASIC4.13□□□□□ -1.75
CLIP2Q9UDT6 AL355365.1-201ENST00000616480 294 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms