Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SPASTQ9UBP0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SPASTQ9UBP0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.8□□□□□ -1.8
SPASTQ9UBP0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SPASTQ9UBP0 MAPK10-372ENST00000641954 3413 ntBASIC3.8□□□□□ -1.8
SPASTQ9UBP0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.8□□□□□ -1.8
SPASTQ9UBP0 DBF4P1-201ENST00000412976 1892 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 SNORA71.3-201ENST00000362582 128 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 U8.11-201ENST00000384699 133 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 U8.12-201ENST00000384701 133 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AL355615.1-201ENST00000406187 641 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 RNA5SP44-201ENST00000410446 133 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 MTND2P16-201ENST00000419987 799 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AL513174.1-201ENST00000423182 629 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 KCTD9P3-201ENST00000434597 1169 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC000041.1-201ENST00000439655 175 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 ELOCP13-201ENST00000443934 329 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC004022.1-201ENST00000447766 1066 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 U8.18-201ENST00000459285 133 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC026403.1-201ENST00000518938 295 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 ARL2BPP5-201ENST00000523141 481 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 LSM6P2-201ENST00000552208 177 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC012182.1-201ENST00000570133 895 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC141257.3-201ENST00000572906 215 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC005412.1-201ENST00000580812 1049 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 DPRXP5-201ENST00000604662 539 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 VN1R74P-201ENST00000613259 503 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC018926.1-201ENST00000616335 435 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC098679.5-201ENST00000624394 571 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AC048347.1-201ENST00000624621 427 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 AL034408.1-202ENST00000636088 415 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SPASTQ9UBP0 IPO8P1-201ENST00000455509 3109 ntBASIC3.79□□□□□ -1.8
SPASTQ9UBP0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 RNU6-115P-201ENST00000364310 107 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 SNORA73.2-201ENST00000364946 201 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 OR1L1-202ENST00000373686 1083 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 SNORA5A-201ENST00000384111 134 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 RPL21P17-201ENST00000397467 475 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 RPL31P1-201ENST00000398116 372 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 GSTA8P-201ENST00000404253 637 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AL138880.1-201ENST00000405824 642 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 YME1L1P1-201ENST00000429435 297 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 CYCSP43-201ENST00000438233 310 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AL133162.1-201ENST00000463228 453 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 ZNF192P1-203ENST00000565888 810 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC244100.1-202ENST00000621554 382 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC004777.1-201ENST00000624317 287 ntBASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.78□□□□□ -1.8
SPASTQ9UBP0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms