Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC011978.2-201ENST00000569835 2054 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 PRO1804-201ENST00000623780 2050 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 RNA5SP72-201ENST00000364442 117 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 U3.15-201ENST00000365398 212 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 RNU6-207P-201ENST00000384137 107 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 RNU6-1151P-201ENST00000384684 107 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 MIR153-1-201ENST00000384914 90 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL355615.1-201ENST00000406187 641 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 RPL21P109-201ENST00000422213 475 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL009174.1-201ENST00000426577 416 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL513175.1-201ENST00000431492 780 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 CYCSP35-201ENST00000451978 304 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC087385.1-201ENST00000475062 312 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 WBP1LP4-201ENST00000505043 344 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 CENPUP2-201ENST00000555897 1186 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL133457.1-201ENST00000564251 987 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC008687.2-201ENST00000597865 520 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 SRGNP1-201ENST00000603392 451 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC092574.1-201ENST00000609771 420 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL356118.1-201ENST00000635272 1078 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 MIR4496-201ENST00000635896 61 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AL732372.2-225ENST00000642124 456 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 AC107081.3-201ENST00000612715 2034 ntBASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCF1Q9UBD9 NCAPGP1-201ENST00000505112 1814 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 RNA5SP50-201ENST00000363731 107 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 SNORA70E-201ENST00000384492 135 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 HMGN2P8-201ENST00000391458 268 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 DSTNP4-201ENST00000399472 474 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 BTBD10P2-201ENST00000404779 676 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 PAICSP7-201ENST00000419829 962 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AL159169.1-201ENST00000421119 127 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 FO393414.1-201ENST00000428697 1184 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 FTH1P6-201ENST00000430768 320 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 UBE2V1P1-201ENST00000430836 445 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AL365396.1-201ENST00000430854 671 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 MOB1AP1-201ENST00000430903 535 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AL050341.1-201ENST00000447743 313 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 PPIAP3-201ENST00000450588 505 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 SNRPGP5-201ENST00000456003 220 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 RNU7-170P-201ENST00000459303 61 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 FTH1P9-201ENST00000513251 355 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 MTCO3P27-201ENST00000514397 196 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 RNU6-416P-201ENST00000516265 103 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 HIGD1AP6-201ENST00000521833 279 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 OR4C2P-201ENST00000530855 1064 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 RN7SL339P-201ENST00000580597 296 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC005412.1-201ENST00000580812 1049 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC133794.1-201ENST00000602731 914 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC009948.4-201ENST00000604692 675 ntBASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLCF1Q9UBD9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms