Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC010205.1-201ENST00000616668 449 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 AC004076.2-201ENST00000620532 3323 ntBASIC5.99□□□□□ -1.45
CNTN3Q9P232 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CNTN3Q9P232 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CNTN3Q9P232 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 RNA5SP183-201ENST00000362452 119 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 RNU6-254P-201ENST00000363377 107 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 SNORD37.1-201ENST00000390968 65 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 RNU4-26P-201ENST00000410270 107 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC073136.2-201ENST00000417282 849 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 CHIAP3-201ENST00000423668 1133 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 LYPLA1P1-201ENST00000434514 622 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 RPS20P5-201ENST00000434808 360 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC108734.1-201ENST00000439549 399 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 FGF7P3-201ENST00000454645 303 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC006512.1-201ENST00000468816 291 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC055855.1-201ENST00000489563 579 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 MTCO1P29-201ENST00000496868 288 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC091885.1-201ENST00000506658 268 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 RNU4-29P-201ENST00000515943 174 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 NCAPGP2-201ENST00000557911 754 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC026464.5-201ENST00000562497 722 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC006116.10-201ENST00000591836 581 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 FKBP1AP1-201ENST00000594588 318 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 RNU6-89P-201ENST00000606519 100 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC000068.2-201ENST00000608816 460 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 OR6R2P-201ENST00000609216 300 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 AC123769.1-201ENST00000530992 3192 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 OR4F13P-202ENST00000560066 2054 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 ASNSP3-201ENST00000451989 1306 ntBASIC5.98□□□□□ -1.45
CNTN3Q9P232 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.98□□□□□ -1.45
CNTN3Q9P232 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CNTN3Q9P232 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CNTN3Q9P232 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CNTN3Q9P232 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNTN3Q9P232 HSPA8P14-201ENST00000552265 1805 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNTN3Q9P232 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNTN3Q9P232 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 AL137141.1-201ENST00000624622 4836 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNTN3Q9P232 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 RNU6-474P-201ENST00000384243 107 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 RN7SKP235-201ENST00000410662 305 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 RPL36AP36-201ENST00000418616 301 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 HSPE1P1-201ENST00000421494 318 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 GPM6BP2-201ENST00000432046 144 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 GPM6BP1-201ENST00000446387 144 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 SNORD125-201ENST00000459538 96 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 UBA52P7-201ENST00000486088 380 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 RN7SL629P-201ENST00000489622 285 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 AC005726.1-201ENST00000494679 427 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 SNORD27.1-201ENST00000516319 72 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 MTCYBP13-201ENST00000578634 1093 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 NF1P5-201ENST00000588287 448 ntBASIC5.97□□□□□ -1.45
CNTN3Q9P232 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CNTN3Q9P232 SUMO2P15-201ENST00000604285 278 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms