Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC026634.1-201ENST00000634369 198 ntBASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 AC116618.1-201ENST00000634617 774 ntBASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 AL356489.2-201ENST00000566968 3528 ntBASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NCKIPSDQ9NZQ3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 RNA5SP502-201ENST00000362694 119 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 RNA5SP366-201ENST00000365454 123 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 SUGT1P1-201ENST00000379514 476 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 ZNF603P-201ENST00000405613 487 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 TMSB10P2-201ENST00000416049 131 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AL035407.1-201ENST00000429211 571 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 MUPP-201ENST00000438111 566 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AL591503.2-201ENST00000442314 1005 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 RPS26P56-201ENST00000444468 240 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC012671.1-201ENST00000451912 203 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 MTCO3P16-201ENST00000454456 754 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC053481.1-201ENST00000467217 306 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL23AP2-201ENST00000471227 466 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC025445.1-201ENST00000502728 300 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 SNX5P1-201ENST00000505757 1041 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC090071.1-201ENST00000507713 644 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 MTND4P2-201ENST00000507767 1203 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 MTND5P13-201ENST00000513046 1079 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 MTCO1P30-201ENST00000515244 580 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 RN7SKP82-201ENST00000516786 223 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 SNORA48.10-201ENST00000516965 160 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 MRPL49P2-201ENST00000521066 465 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 UBE2NP1-201ENST00000545592 458 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC007115.1-201ENST00000546853 234 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AGGF1P8-201ENST00000562979 1000 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL23AP97-201ENST00000568955 471 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC138915.2-201ENST00000569776 97 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 ISCA1P3-201ENST00000577104 373 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC093227.2-201ENST00000589357 285 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 Z98200.1-201ENST00000607298 470 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC005332.6-201ENST00000613178 446 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 uc_338.13-201ENST00000618243 179 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AF246928.1-201ENST00000623768 87 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC007494.3-201ENST00000624660 743 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AL356121.2-201ENST00000624715 780 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 AC016588.2-201ENST00000632484 3021 ntBASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKIPSDQ9NZQ3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 MAPK10-253ENST00000641010 4072 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 Y_RNA.77-201ENST00000362962 107 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL23AP26-201ENST00000412728 464 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC092634.6-201ENST00000418558 192 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 SAGE2P-201ENST00000420011 2126 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 B3GNT2P1-201ENST00000434960 952 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms