Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC005242.1-201ENST00000585658 438 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AL161637.1-201ENST00000622380 412 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AL672296.1-201ENST00000427780 2158 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.89
TREX1Q9NSU2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 SNORD56.3-201ENST00000363507 71 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 RNU1-33P-201ENST00000364249 162 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 HMGN1P24-201ENST00000412282 298 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AIMP1P1-201ENST00000418670 937 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC010468.1-201ENST00000461022 817 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC021678.1-201ENST00000505195 936 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 RNU6-751P-201ENST00000516382 101 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 SNORA64.4-201ENST00000516632 81 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC025260.1-201ENST00000548858 430 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC010198.2-201ENST00000550612 259 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC074029.1-201ENST00000552531 1044 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 RPL21P12-201ENST00000559810 515 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC022146.1-201ENST00000595307 847 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC016911.1-201ENST00000613297 452 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 AC024023.1-201ENST00000624530 922 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 FAM157B-203ENST00000639350 358 ntBASIC3.27□□□□□ -1.89
TREX1Q9NSU2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TREX1Q9NSU2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 RNA5SP50-201ENST00000363731 107 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 RNU6-98P-201ENST00000384173 107 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 MTATP6P31-201ENST00000406985 692 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 MIR1303-201ENST00000408625 86 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 RNU2-71P-201ENST00000411395 189 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 RPS15AP40-201ENST00000419621 391 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AL590623.1-201ENST00000427864 105 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 CDC27P1-201ENST00000445384 715 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 RSL24D1P2-201ENST00000445584 366 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC115115.1-201ENST00000449927 248 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC091564.1-201ENST00000464563 479 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 SNORA31.13-201ENST00000516624 135 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 RN7SKP277-201ENST00000516895 283 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 CBX3P2-202ENST00000583365 535 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 MIR3158-1-201ENST00000583596 81 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC009948.4-201ENST00000604692 675 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 BX322635.1-201ENST00000605804 496 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC016877.3-201ENST00000606778 504 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC104820.1-201ENST00000624183 307 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AC034229.5-201ENST00000624258 185 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 Z83843.1-201ENST00000604070 3685 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.26□□□□□ -1.89
TREX1Q9NSU2 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
TREX1Q9NSU2 MTND4P34-201ENST00000572715 1371 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 RNA5SP383-201ENST00000362934 120 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 RNU6-805P-201ENST00000365643 106 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 NUP35P2-201ENST00000416748 943 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AL590103.1-201ENST00000434488 307 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC005019.1-201ENST00000436455 431 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 RPL7P29-201ENST00000437151 728 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms