Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNTNAP3Q9BZ76 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AL122126.1-201ENST00000546905 1318 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 Y_RNA.170-201ENST00000363746 110 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 RNU6-1029P-201ENST00000384109 107 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 RNU6-39P-201ENST00000384344 107 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 RNU6-1117P-201ENST00000384525 104 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AL645733.1-201ENST00000402250 217 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 PRRC2CP1-201ENST00000404428 159 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AL139156.1-201ENST00000412785 841 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 E2F6P2-201ENST00000420708 748 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 MTATP6P16-201ENST00000434543 526 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC099799.1-201ENST00000439809 192 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AL445687.2-201ENST00000458156 728 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 TRBVB-201ENST00000477100 408 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC011005.3-201ENST00000491624 395 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 SCARNA16.2-201ENST00000516520 172 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 RNU6-570P-201ENST00000517051 105 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC018552.3-201ENST00000567416 561 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC015720.2-201ENST00000567709 334 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 MIR3135A-201ENST00000578460 77 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 MIR3146-201ENST00000580367 79 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 MIR4436B2-201ENST00000581415 91 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 MIR4436B1-201ENST00000583272 91 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 RAC1P9-201ENST00000604990 392 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AL138960.1-201ENST00000613838 513 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 U2.14-201ENST00000615943 113 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 AL442639.1-201ENST00000625030 1899 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 PABPC1P7-201ENST00000413177 1513 ntBASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNTNAP3Q9BZ76 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 KARSP2-201ENST00000415696 1639 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 KPNA2P2-201ENST00000419546 1489 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AL596244.1-201ENST00000567068 3779 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 AL161901.1-201ENST00000624954 3425 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 RNU1-150P-201ENST00000362491 162 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 Y_RNA.126-201ENST00000363382 111 ntBASIC6.03□□□□□ -1.44
CNTNAP3Q9BZ76 SNORA62.1-201ENST00000364287 154 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms