Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNA5SP92-201ENST00000516437 110 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 SETP7-201ENST00000552169 453 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 FKBP1AP1-201ENST00000594588 318 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC073091.2-201ENST00000603205 907 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC010424.2-201ENST00000607594 443 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL590282.1-201ENST00000610379 1136 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC002550.2-201ENST00000621246 394 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 CASC19-248ENST00000641674 1356 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC009951.1-201ENST00000623674 2614 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 Y_RNA.1-201ENST00000352915 104 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 Y_RNA.9-201ENST00000362354 101 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 RNU6-263P-201ENST00000363811 107 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 RNY4P16-201ENST00000364768 94 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 RNU6-282P-201ENST00000365357 103 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 SNORA70-201ENST00000384436 135 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 RPL7P57-201ENST00000423238 740 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 DPPA2P1-201ENST00000428060 556 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 GAPDHP58-201ENST00000438477 1006 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 MTATP6P23-201ENST00000440153 476 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 HMGB1P25-201ENST00000468402 607 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC008953.1-201ENST00000497334 318 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC017037.2-201ENST00000513850 890 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC010342.1-201ENST00000514047 877 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 HNRNPCP4-201ENST00000571636 900 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 MIR3146-201ENST00000580367 79 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AL159972.1-201ENST00000625150 448 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 AC100778.3-201ENST00000580060 1750 ntBASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM55Q9BYV6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 RNU6-181P-201ENST00000363225 107 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 Y_RNA.256-201ENST00000364594 104 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 Y_RNA.450-201ENST00000384198 113 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 MIR1286-201ENST00000408112 78 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 Y_RNA.604-201ENST00000410574 102 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC022028.1-201ENST00000412054 408 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 CHIAP3-201ENST00000423668 1133 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC006548.1-201ENST00000427470 102 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 CKS1BP5-201ENST00000434172 273 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC119618.1-201ENST00000434191 222 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC002486.1-201ENST00000435098 391 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 FTH1P1-201ENST00000437933 532 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms