Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC097504.1-201ENST00000515103 2415 ntBASIC3.33□□□□□ -1.88
VGLL1Q99990 CDR1-202ENST00000625883 1485 ntBASIC3.33□□□□□ -1.88
VGLL1Q99990 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.33□□□□□ -1.88
VGLL1Q99990 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
VGLL1Q99990 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VGLL1Q99990 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VGLL1Q99990 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.32□□□□□ -1.88
VGLL1Q99990 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 AL133412.1-201ENST00000380194 2992 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 Y_RNA.18-201ENST00000362461 102 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 RNU6-216P-201ENST00000363282 104 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VGLL1Q99990 RNU6-1119P-201ENST00000384349 108 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 RNU6-178P-201ENST00000384631 104 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 MIR659-201ENST00000384963 97 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VGLL1Q99990 SDHCP2-201ENST00000398565 501 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 NCSTNP1-201ENST00000406229 144 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 RNU2-16P-201ENST00000410712 136 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 MIR1911-201ENST00000410783 80 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 SNORA74C-2-201ENST00000411179 201 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AL663109.1-201ENST00000411498 844 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 JKAMPP1-201ENST00000413804 919 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC004022.2-201ENST00000413824 193 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 RPS23P10-201ENST00000416185 486 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC093698.1-201ENST00000423843 571 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 MED14P1-201ENST00000430517 648 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AL049745.1-201ENST00000433953 286 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 UBE2V1P3-201ENST00000439651 417 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 MTND2P20-201ENST00000440805 661 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 FHP1-201ENST00000442741 703 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 SLC31A1P1-201ENST00000451221 567 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 MTCO3P11-201ENST00000455103 774 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 RPS15AP1-201ENST00000457423 391 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 ARPC3P2-201ENST00000457786 533 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 TPT1P7-201ENST00000458300 517 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 RNU6-956P-201ENST00000458868 103 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 RNU6-1218P-201ENST00000458990 108 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 RPS3AP41-201ENST00000462701 778 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.32□□□□□ -1.88
VGLL1Q99990 IGLV2-34-201ENST00000490007 283 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 KRT19P6-201ENST00000510983 209 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC008802.1-201ENST00000519121 791 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 OR5M7P-201ENST00000526140 972 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.32□□□□□ -1.88
VGLL1Q99990 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.32□□□□□ -1.88
VGLL1Q99990 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AL352979.3-201ENST00000553515 247 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC093519.1-201ENST00000566109 298 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 EIF1P4-201ENST00000572664 335 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC091042.1-201ENST00000579213 173 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 MIR3934-201ENST00000579806 107 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.32□□□□□ -1.88
VGLL1Q99990 KPNA2P3-201ENST00000584190 848 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC022146.1-201ENST00000595307 847 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC083899.3-201ENST00000603413 594 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC107304.1-201ENST00000604229 296 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC010200.2-201ENST00000605098 235 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 AC087752.4-201ENST00000605911 462 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.32□□□□□ -1.88
VGLL1Q99990 AC010678.1-201ENST00000614118 713 ntBASIC3.32□□□□□ -1.88
VGLL1Q99990 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms