Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIR585-201ENST00000384887 94 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC013442.1-201ENST00000397347 228 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 RPS27AP11-201ENST00000402798 447 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU2-50P-201ENST00000410494 143 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AMD1P2-201ENST00000412936 992 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 OR4F13P-201ENST00000428478 931 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 RPS17P8-201ENST00000434525 335 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AL451139.1-201ENST00000434718 346 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 SDCBPP1-201ENST00000440192 890 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 YWHAZP2-201ENST00000440317 728 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC002542.1-201ENST00000440683 193 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 USP9YP15-201ENST00000442391 422 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 YWHAQP9-201ENST00000445891 512 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 DNAJC19P8-201ENST00000452887 259 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AL033528.1-201ENST00000453780 140 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC007537.2-201ENST00000472093 511 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 GAPDHP39-201ENST00000481866 979 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 BTG4P1-201ENST00000510421 183 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 SNORA18.6-201ENST00000516792 115 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AF235103.2-201ENST00000525753 346 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC063949.1-201ENST00000552900 865 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC107954.1-201ENST00000565906 727 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 MIR4700-201ENST00000578311 74 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 KPNA2P3-201ENST00000584190 848 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC022726.1-201ENST00000587475 207 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC068020.1-201ENST00000594215 661 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC130352.1-201ENST00000602979 661 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC010200.2-201ENST00000605098 235 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 FAM27B-201ENST00000610601 213 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AL161616.1-201ENST00000611867 286 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC040896.1-201ENST00000613819 479 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC136475.10-201ENST00000620253 385 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 AC007342.8-201ENST00000623278 678 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 Y_RNA.548-201ENST00000384656 105 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 GSTA9P-201ENST00000406231 611 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU4-55P-201ENST00000410731 137 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC009302.1-201ENST00000417147 390 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 BX295541.1-201ENST00000417774 250 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AL389915.1-201ENST00000422463 466 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC104333.2-201ENST00000422630 192 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 MTCYBP6-201ENST00000441810 138 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC104306.1-201ENST00000449702 371 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 MTCO3P11-201ENST00000455103 774 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC245028.2-201ENST00000458673 253 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC012170.1-201ENST00000495139 359 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 RN7SKP276-201ENST00000516242 268 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 RNA5SP392-201ENST00000516905 112 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC087276.1-201ENST00000529659 480 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AP001880.2-201ENST00000538233 448 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC133555.2-201ENST00000550213 292 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AL049839.1-201ENST00000556151 657 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 COX6CP4-201ENST00000605798 228 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AL133255.1-201ENST00000606374 441 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms