Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 NF1P10-201ENST00000613227 742 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 AC244205.2-202ENST00000635781 342 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 AP006437.1-201ENST00000641440 3685 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 RNU6-618P-201ENST00000363518 112 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 AC093663.2-201ENST00000484625 313 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 AC079298.2-201ENST00000623885 459 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 MIR499A-201ENST00000384903 122 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 RNU4-26P-201ENST00000410270 107 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 RPL5P16-201ENST00000471467 790 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 AC092436.1-201ENST00000506450 503 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13AQ96RL7 AC103810.6-201ENST00000606708 136 ntBASIC2.67□□□□□ -1.98
VPS13AQ96RL7 MIR27B-201ENST00000385129 97 ntBASIC2.66□□□□□ -1.98
VPS13AQ96RL7 CACYBPP2-201ENST00000453625 678 ntBASIC2.66□□□□□ -1.98
VPS13AQ96RL7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 SNORA80E-201ENST00000384744 137 ntBASIC2.66□□□□□ -1.98
VPS13AQ96RL7 MIR181A2-201ENST00000384863 110 ntBASIC2.66□□□□□ -1.98
VPS13AQ96RL7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 RN7SL330P-201ENST00000469709 307 ntBASIC2.66□□□□□ -1.98
VPS13AQ96RL7 AC009101.1-201ENST00000568135 242 ntBASIC2.66□□□□□ -1.98
VPS13AQ96RL7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 HMGB1P50-201ENST00000605814 607 ntBASIC2.66□□□□□ -1.98
VPS13AQ96RL7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13AQ96RL7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.65□□□□□ -1.98
VPS13AQ96RL7 RNA5SP31-201ENST00000411144 127 ntBASIC2.65□□□□□ -1.98
VPS13AQ96RL7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.65□□□□□ -1.98
VPS13AQ96RL7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.65□□□□□ -1.98
VPS13AQ96RL7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.65□□□□□ -1.98
VPS13AQ96RL7 RPL23AP70-201ENST00000483361 460 ntBASIC2.65□□□□□ -1.98
VPS13AQ96RL7 RPL9P6-201ENST00000492764 598 ntBASIC2.65□□□□□ -1.98
VPS13AQ96RL7 RN7SL636P-201ENST00000497504 294 ntBASIC2.65□□□□□ -1.98
VPS13AQ96RL7 HNRNPKP5-201ENST00000515300 253 ntBASIC2.65□□□□□ -1.98
VPS13AQ96RL7 AC022884.3-201ENST00000579571 248 ntBASIC2.65□□□□□ -1.98
VPS13AQ96RL7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.65□□□□□ -1.98
VPS13AQ96RL7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13AQ96RL7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.65□□□□□ -1.98
VPS13AQ96RL7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13AQ96RL7 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.65□□□□□ -1.99
VPS13AQ96RL7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS13AQ96RL7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
VPS13AQ96RL7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13AQ96RL7 AL359511.1-201ENST00000402970 211 ntBASIC2.65□□□□□ -1.99
VPS13AQ96RL7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13AQ96RL7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.65□□□□□ -1.99
VPS13AQ96RL7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13AQ96RL7 AL590639.1-201ENST00000456484 337 ntBASIC2.65□□□□□ -1.99
VPS13AQ96RL7 OR9N1P-201ENST00000491296 333 ntBASIC2.65□□□□□ -1.99
VPS13AQ96RL7 RN7SKP82-201ENST00000516786 223 ntBASIC2.65□□□□□ -1.99
VPS13AQ96RL7 AL035425.3-201ENST00000564206 4996 ntBASIC2.65□□□□□ -1.99
VPS13AQ96RL7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 SNORA31.1-201ENST00000515993 133 ntBASIC2.64□□□□□ -1.99
VPS13AQ96RL7 SNORA31.5-201ENST00000516190 133 ntBASIC2.64□□□□□ -1.99
VPS13AQ96RL7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 MIR518C-201ENST00000384822 101 ntBASIC2.64□□□□□ -1.99
VPS13AQ96RL7 RPL31P45-201ENST00000419532 356 ntBASIC2.64□□□□□ -1.99
VPS13AQ96RL7 AC010198.2-201ENST00000550612 259 ntBASIC2.64□□□□□ -1.99
VPS13AQ96RL7 ISCA1P3-201ENST00000577104 373 ntBASIC2.64□□□□□ -1.99
VPS13AQ96RL7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 AL138820.1-201ENST00000617901 5305 ntBASIC2.64□□□□□ -1.99
VPS13AQ96RL7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13AQ96RL7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13AQ96RL7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
VPS13AQ96RL7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms