Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC098679.4-201ENST00000624241 654 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 AC012618.3-205ENST00000637896 1496 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF33CP-201ENST00000432492 2030 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 OR56B2P-202ENST00000641377 2453 ntBASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP3Q96JB5 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 RAD17P1-201ENST00000418130 2042 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 RNA5SP307-201ENST00000362863 116 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 RNU6-398P-201ENST00000384143 109 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC007066.1-201ENST00000392902 381 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AL121834.1-202ENST00000404494 277 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AL133384.1-201ENST00000412744 351 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 UBE2FP3-201ENST00000436366 524 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 MTND4P6-201ENST00000438297 472 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AL138878.2-201ENST00000440581 1241 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 MTCO2P18-201ENST00000457151 658 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC097493.1-201ENST00000463958 372 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC109486.1-201ENST00000486833 374 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 RPS4XP15-201ENST00000489210 795 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AK3P4-201ENST00000504283 583 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC010424.1-201ENST00000506336 297 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 RNA5SP464-201ENST00000516251 108 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 RN7SKP277-201ENST00000516895 283 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AP000827.1-201ENST00000527814 258 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF705CP-201ENST00000530515 889 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC008127.2-201ENST00000549925 1075 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC008759.1-201ENST00000589783 983 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 SLC25A36P1-201ENST00000590111 465 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC073544.2-201ENST00000601155 540 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC010201.1-201ENST00000605051 540 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AL353600.1-201ENST00000608148 251 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC068722.2-201ENST00000618734 544 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC018816.2-201ENST00000621460 353 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 AC006927.3-201ENST00000638789 384 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 MTND5P28-201ENST00000438005 1594 ntBASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.98□□□□□ -1.61
CDK5RAP3Q96JB5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC012020.1-201ENST00000624541 1728 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 U3.4-201ENST00000363352 213 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RNA5SP22-201ENST00000365393 109 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RNU6-723P-201ENST00000383973 107 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 MIR585-201ENST00000384887 94 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 MIR153-1-201ENST00000384914 90 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RPEP3-201ENST00000425462 676 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RPS6P12-201ENST00000432491 726 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC011998.1-201ENST00000433403 117 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 EEF1E1P1-201ENST00000446998 430 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 NDUFA12P1-201ENST00000455914 406 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC005008.1-201ENST00000456151 612 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RPL30P9-201ENST00000465586 330 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 S100A11P1-201ENST00000477525 312 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RN7SL812P-201ENST00000493791 279 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 MTND4P2-201ENST00000507767 1203 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC015795.1-201ENST00000513669 327 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms