Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 OR51AB1P-201ENST00000429046 620 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 MTND2P6-201ENST00000455337 1030 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 PLGLA-201ENST00000465668 449 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 PCBP2P3-201ENST00000509726 843 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 RN7SL339P-201ENST00000580597 296 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 MIR3944-201ENST00000581277 108 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC022146.1-201ENST00000595307 847 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC011468.4-201ENST00000603942 409 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AL359535.1-201ENST00000612100 1087 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC104307.1-201ENST00000616142 196 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 AC110801.1-201ENST00000623590 212 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 FAM157B-203ENST00000639350 358 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AL512646.1-201ENST00000269395 1077 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC127526.1-201ENST00000417526 366 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 MTND2P16-201ENST00000419987 799 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 MTCO1P43-201ENST00000431831 488 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC068135.1-201ENST00000446164 246 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC008264.1-201ENST00000447612 367 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 BX276092.4-201ENST00000452056 248 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC097262.1-201ENST00000452559 548 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 RPL23AP23-201ENST00000452590 471 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 PRSS3P4-201ENST00000453323 162 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 RPS4XP10-201ENST00000465034 731 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC091153.1-201ENST00000466297 402 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AP000893.1-201ENST00000474462 794 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 TRBV8-2-201ENST00000475637 270 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC025181.1-201ENST00000477507 416 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC073522.1-201ENST00000483312 377 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 HSPD1P15-201ENST00000505573 1122 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC093014.1-201ENST00000548926 724 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC233266.2-201ENST00000567067 528 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 HMGN2P28-201ENST00000606102 262 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC091152.2-201ENST00000591628 2569 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 CR383658.2-201ENST00000547576 1525 ntBASIC3.39□□□□□ -1.87
ECHDC3Q96DC8 AC092326.2-201ENST00000624772 1561 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 MIR208A-201ENST00000362287 71 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 RNVU1-14-201ENST00000384770 164 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AL355379.1-201ENST00000405542 640 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 BX323014.1-201ENST00000412876 237 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 HMGB3P31-201ENST00000413333 595 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC005326.1-201ENST00000429197 123 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 HMGB1P45-201ENST00000435986 653 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 ATP5C1P1-201ENST00000441945 895 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 AC007000.2-201ENST00000442564 487 ntBASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC3Q96DC8 RPL12P26-201ENST00000452430 487 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms