Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 RNA5SP49-201ENST00000516450 115 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 MED28P5-201ENST00000528254 438 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AC068831.4-201ENST00000556118 109 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AL132657.2-201ENST00000564417 358 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 MIR4637-201ENST00000582405 84 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AC245036.5-201ENST00000596330 847 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AC090948.1-201ENST00000607464 549 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 AL590282.1-201ENST00000610379 1136 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 DUXAP10-204ENST00000612052 616 ntBASIC3.93□□□□□ -1.78
VPS33AQ96AX1 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS33AQ96AX1 GABPAP-201ENST00000419271 1356 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RNU6-600P-201ENST00000362524 99 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 SNORA58B-201ENST00000364259 136 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RNU4-68P-201ENST00000364314 141 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RNA5SP505-201ENST00000364748 108 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RHEBP3-201ENST00000411920 351 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 FAR2P2-201ENST00000413041 594 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AL513175.2-201ENST00000422071 443 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 NANOGP5-201ENST00000424456 877 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC092648.1-201ENST00000425870 423 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 USP9YP11-201ENST00000427537 717 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC096638.2-201ENST00000434965 711 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RPL23AP76-201ENST00000441860 458 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 snoU13.24-201ENST00000458998 104 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC026410.2-201ENST00000460281 156 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RPL9P32-201ENST00000464118 620 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 HMGB1P25-201ENST00000468402 607 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 ACTG1P13-201ENST00000486987 1043 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RPL23AP55-201ENST00000498163 452 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 KCTD9P2-201ENST00000512203 1013 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 RNU7-143P-201ENST00000516781 65 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 SNORA31.20-201ENST00000517111 133 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 NARSP2-201ENST00000518524 679 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC006518.1-201ENST00000541449 943 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AL121603.1-201ENST00000553815 142 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 HSPE1P3-201ENST00000559254 309 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 MTND1P8-201ENST00000571424 950 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC022655.2-201ENST00000577280 318 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 MIR3690-201ENST00000580266 75 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 MRPS35P3-201ENST00000603189 709 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC010738.1-201ENST00000604970 987 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC006023.2-201ENST00000609916 167 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC023043.4-201ENST00000612081 449 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 MIR1322-201ENST00000638013 71 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AL049780.3-201ENST00000624612 1583 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.92□□□□□ -1.78
VPS33AQ96AX1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS33AQ96AX1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 RNA5SP235-201ENST00000365411 114 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms